[MacPorts] #57938: scalapack @2.0.2_4 +openmpi failed configure on macOS Mojave
MacPorts
noreply at macports.org
Tue Jan 22 14:33:40 UTC 2019
#57938: scalapack @2.0.2_4 +openmpi failed configure on macOS Mojave
-----------------------+-----------------------
Reporter: Bianca338 | Owner: (none)
Type: defect | Status: new
Priority: Normal | Milestone:
Component: ports | Version:
Keywords: | Port: scalapack
-----------------------+-----------------------
Configuration fails when building BLACS.
A similar issue was reported in https://trac.macports.org/ticket/52316
with the MPI implementation mpich and was resolved in revision
https://github.com/macports/macports-
ports/commit/9b1bac79563d8402d6352ffb0a86c9f3bad9fe88#diff-
af4fc063fec009d42130985002ebc6d0.
However, the issue is still there when configuring scalapack with openmpi.
Here are the last few lines of the main log file (scalapack/main.log):
{{{
:info:configure -- =========
:info:configure -- Compiling and Building BLACS INSTALL Testing to set
correct variables
:info:configure CMake Error at CMAKE/FortranMangling.cmake:27 (MESSAGE):
:info:configure Configure in the BLACS INSTALL directory FAILED
:info:configure Call Stack (most recent call first):
:info:configure CMakeLists.txt:122 (COMPILE)
:info:configure -- Configuring incomplete, errors occurred!
:info:configure See also
"/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_scalapack/scalapack/work/build/CMakeFiles/CMakeOutput.log".
:info:configure Command failed: cd
"/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_scalapack/scalapack/work/build"
&& /opt/local/bin/cmake -G "CodeBlocks - Unix Makefiles"
-DCMAKE_BUILD_TYPE=MacPorts -DCMAKE_INSTALL_PREFIX="/opt/local"
-DCMAKE_INSTALL_NAME_DIR="/opt/local/lib"
-DCMAKE_SYSTEM_PREFIX_PATH="/opt/local;/usr" -DCMAKE_C_COMPILER="$CC"
-DCMAKE_CXX_COMPILER="$CXX" -DCMAKE_POLICY_DEFAULT_CMP0025=NEW
-DCMAKE_POLICY_DEFAULT_CMP0060=NEW -DCMAKE_VERBOSE_MAKEFILE=ON
-DCMAKE_COLOR_MAKEFILE=ON -DCMAKE_FIND_FRAMEWORK=LAST
-DCMAKE_EXPORT_COMPILE_COMMANDS=ON
-DCMAKE_MODULE_PATH="/opt/local/share/cmake/Modules"
-DCMAKE_PREFIX_PATH="/opt/local/share/cmake/Modules"
-DCMAKE_BUILD_WITH_INSTALL_RPATH:BOOL=ON
-DCMAKE_INSTALL_RPATH="/opt/local/lib" -Wno-dev
-DCMAKE_INSTALL_NAME_DIR=/opt/local/lib -DBUILD_SHARED_LIBS=ON
-DBUILD_TESTING=ON -DCMAKE_OSX_ARCHITECTURES="x86_64"
-DCMAKE_OSX_DEPLOYMENT_TARGET="10.14"
-DCMAKE_OSX_SYSROOT="/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk"
-DMPI_C_COMPILER=mpicc-openmpi-mp -DMPI_Fortran_COMPILER=mpif90-openmpi-mp
-DMPIEXEC=/opt/local/bin/mpiexec-openmpi-mp
-DLAPACK_LIBRARIES="-L/opt/local/lib -lvecLibFort"
/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_scalapack/scalapack/work/scalapack-2.0.2
:info:configure Exit code: 1
:error:configure Failed to configure scalapack: configure failure: command
execution failed
:debug:configure Error code: NONE
:debug:configure Backtrace: configure failure: command execution failed
:debug:configure while executing
:debug:configure "$procedure $targetname"
}}}
and here are the last few lines of the CMake log file in
scalapack/work/build/CMakeFiles/CMakeOutput.log
{{{
Determining if the Fortran compiler supports Fortran 90 passed with the
following output:
Change Dir:
/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_scalapack/scalapack/work/build/CMakeFiles/CMakeTmp
Run Build Command:"/opt/local/bin/gmake" "cmTC_82c3d/fast"
/opt/local/bin/gmake -f CMakeFiles/cmTC_82c3d.dir/build.make
CMakeFiles/cmTC_82c3d.dir/build
gmake[1]: Entering directory
'/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_scalapack/scalapack/work/build/CMakeFiles/CMakeTmp'
Building Fortran object
CMakeFiles/cmTC_82c3d.dir/testFortranCompilerF90.f90.o
/opt/local/bin/mpif90-openmpi-mp -pipe -Os -arch x86_64 -isysroot
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk
-mmacosx-version-min=10.14 -c
/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_scalapack/scalapack/work/build/CMakeFiles/CMakeTmp/testFortranCompilerF90.f90
-o CMakeFiles/cmTC_82c3d.dir/testFortranCompilerF90.f90.o
Linking Fortran executable cmTC_82c3d
/opt/local/bin/cmake -E cmake_link_script
CMakeFiles/cmTC_82c3d.dir/link.txt --verbose=1
/opt/local/bin/mpif90-openmpi-mp -L/opt/local/lib
-Wl,-headerpad_max_install_names
-Wl,-syslibroot,/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk
-pipe -Os -arch x86_64 -isysroot
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk
-mmacosx-version-min=10.14
CMakeFiles/cmTC_82c3d.dir/testFortranCompilerF90.f90.o -o cmTC_82c3d
gmake[1]: Leaving directory
'/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_scalapack/scalapack/work/build/CMakeFiles/CMakeTmp'
}}}
--
Ticket URL: <https://trac.macports.org/ticket/57938>
MacPorts <https://www.macports.org/>
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