[MacPorts] #59148: pymol does not run/install after update

MacPorts noreply at macports.org
Wed Oct 2 22:25:14 UTC 2019


#59148: pymol does not run/install after update
--------------------------+-----------------------
  Reporter:  ubaumann324  |      Owner:  jwhowarth
      Type:  defect       |     Status:  assigned
  Priority:  Normal       |  Milestone:
 Component:  ports        |    Version:  2.5.4
Resolution:               |   Keywords:  PyMOL
      Port:  pymol        |
--------------------------+-----------------------
Changes (by jmroot):

 * owner:  (none) => jwhowarth
 * status:  new => assigned
 * version:   => 2.5.4


Old description:

> I have updated MacPorts today and upgraded outdated (not pymol
> a.f.a.i.k), Pymol then crashes. Uninstalling, cleaning and re-install
> does not work
>
> sudo port install pymol
> --->  Computing dependencies for pymol
> --->  Staging pymol into destroot
> Error: Failed to destroot pymol: command execution failed
> Error: See
> /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_pymol/pymol/main.log
> for details.
> Error: Follow https://guide.macports.org/#project.tickets to report a
> bug.
> Error: Processing of port pymol failed

New description:

 I have updated MacPorts today and upgraded outdated (not pymol a.f.a.i.k),
 Pymol then crashes. Uninstalling, cleaning and re-install does not work
 {{{
 sudo port install pymol
 --->  Computing dependencies for pymol
 --->  Staging pymol into destroot
 Error: Failed to destroot pymol: command execution failed
 Error: See
 /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_pymol/pymol/main.log
 for details.
 Error: Follow https://guide.macports.org/#project.tickets to report a bug.
 Error: Processing of port pymol failed
 }}}

--

Comment:

 The log shows that you are running MacPorts 2.5.4. The current version is
 2.6.0; please update.

-- 
Ticket URL: <https://trac.macports.org/ticket/59148#comment:1>
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