[MacPorts] #60976: Failed to configure R, requires bzip2 version >= 1.0.6, yet bzip2 Version 1.0.8 is installed
MacPorts
noreply at macports.org
Sat Aug 8 16:21:49 UTC 2020
#60976: Failed to configure R, requires bzip2 version >= 1.0.6, yet bzip2 Version
1.0.8 is installed
----------------------+--------------------
Reporter: raramayo | Owner: (none)
Type: defect | Status: new
Priority: Normal | Milestone:
Component: ports | Version:
Keywords: | Port:
----------------------+--------------------
Fails to configure R.
Log file states:
{{{
:info:configure checking if zlib version >= 1.2.5... yes
:info:configure checking whether zlib support suffices... yes
:info:configure checking mmap support for zlib... yes
:info:configure checking for BZ2_bzlibVersion in -lbz2... yes
:info:configure checking bzlib.h usability... yes
:info:configure checking bzlib.h presence... yes
:info:configure checking for bzlib.h... yes
:info:configure checking if bzip2 version >= 1.0.6... no
:info:configure checking whether bzip2 support suffices... configure:
error: bzip2 library and headers are required
:info:configure Command failed: cd
"/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/R-4.0.2"
&& ./configure --prefix=/opt/local/Library/Frameworks --enable-R-framework
--enable-memory-profiling --enable-R-shlib --enable-BLAS-shlib --without-
tcltk --with-cairo --disable-java --with-included-gettext --without-blas
--without-lapack --with-recommended-packages --with-x
--x-include=/opt/local/include/X11 --x-lib=/opt/local/lib
:info:configure Exit code: 1
:error:configure Failed to configure R, consult
/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/R-4.0.2/config.log
:error:configure Failed to configure R: configure failure: command
execution failed
:debug:configure Error code: NONE
:debug:configure Backtrace: configure failure: command execution failed
:debug:configure while executing
:debug:configure "$procedure $targetname"
:error:configure See
/opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/main.log
for details.
}}}
I have bzip2 installed
I tried issuing the `port rev-upgrade` command, which failed, and now when
I call `R`, I get:
{{{
dyld: Library not loaded: /opt/local/lib/libicuuc.65.dylib
Referenced from:
/opt/local/Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libR.dylib
Reason: image not found
Abort trap: 6
}}}
--
Ticket URL: <https://trac.macports.org/ticket/60976>
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