[MacPorts] #65312: bowtie v 1.2.3

[MacPorts]

#65312: bowtie  v 1.2.3
-----------------------+---------------------------------
  Reporter:  Minhas61  |      Owner:  MarcusCalhoun-Lopez
      Type:  defect    |     Status:  assigned
  Priority:  Normal    |  Milestone:
 Component:  ports     |    Version:
Resolution:            |   Keywords:
      Port:  bowtie    |
-----------------------+---------------------------------
Changes (by ryandesign):

 * status:  new => assigned
 * owner:  (none) => MarcusCalhoun-Lopez


Comment:

 Although you haven't attached your log file yet, we do see build failure
 of this port on our [https://build.macports.org/builders/ports-
 12_x86_64-builder/builds/31742/steps/install-port/logs/stdio Monterey] and
 [https://build.macports.org/builders/ports-
 11_x86_64-builder/builds/74482/steps/install-port/logs/stdio Big Sur]
 buildbot workers so that may be the same problem you're seeing:

 {{{
 /opt/local/include/tbb/compat/thread:45:33: error: target of using
 declaration conflicts with declaration already in scope
     using tbb::this_tbb_thread::get_id;
                                 ^
 /opt/local/include/tbb/compat/../tbb_thread.h:331:60: note: target of
 using declaration
     __TBB_DEPRECATED_IN_VERBOSE_MODE inline tbb_thread::id get_id() {
 return internal::thread_get_id_v3(); }
                                                            ^
 }}}

 (It also
 [https://build.macports.org/builders/ports-10.7_x86_64-builder/builds/101830/steps
 /install-port/logs/stdio fails on the Lion worker] but due to a clang
 segfault which is unrelated to this issue.)

 Builds of bowtie 1.2.3 were successful on the buildbot workers for Mac OS
 X 10.6 through macOS 10.15 inclusive (except Mac OS X 10.7) back in 2019
 so something may have changed since then. For example, tbb has been
 updated several times; maybe bowtie 1.2.3 is incompatible with the new
 tbb.

 bowtie should probably be updated to the latest version, currently 1.3.1.
 Maybe it already includes a fix for this. I note in its changelog that it
 mentions removing some third-party library dependencies and that it
 migrates to python 3.

-- 
Ticket URL: <https://trac.macports.org/ticket/65312#comment:3>
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