[MacPorts] #66332: R @4.2.2_1: error when trying to install.packages possibly due to port/rpath configuration

MacPorts noreply at macports.org
Wed Nov 23 13:08:46 UTC 2022


#66332: R @4.2.2_1: error when trying to install.packages possibly due to
port/rpath configuration
---------------------------+--------------------
  Reporter:  MarcKaufmann  |      Owner:  (none)
      Type:  defect        |     Status:  new
  Priority:  Normal        |  Milestone:
 Component:  ports         |    Version:
Resolution:                |   Keywords:
      Port:  R             |
---------------------------+--------------------

Comment (by kencu):

 {{{
   CCLD     libuv.la
 /opt/local/bin/clang++-mp-14 -std=gnu++14 -dynamiclib
 -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module
 -multiply_defined suppress
 -L/opt/local/Library/Frameworks/R.framework/Resources/lib -L/opt/local/lib
 -Wl,-headerpad_max_install_names -Wl,-rpath,/opt/local/lib/libgcc -arch
 x86_64 -o fs.so dir.o error.o file.o fs.o getmode.o id.o init.o link.o
 path.o utils.o unix/getmode.o ./libuv-1.38.1/.libs/libuv.a -pthread
 -F/opt/local/Library/Frameworks/R.framework/.. -framework R -Wl,-framework
 -Wl,CoreFoundation
 ld: warning: text-based stub file
 /System/Library/Frameworks//CoreFoundation.framework/CoreFoundation.tbd
 and library file
 /System/Library/Frameworks//CoreFoundation.framework/CoreFoundation are
 out of sync. Falling back to library file for linking.
 installing to /Users/cunningh/Library/R/x86_64/4.2/library/00LOCK-
 fs/00new/fs/libs
 ** R
 ** inst
 ** byte-compile and prepare package for lazy loading
 ** help
 *** installing help indices
 ** building package indices
 ** installing vignettes
 ** testing if installed package can be loaded from temporary location
 ** checking absolute paths in shared objects and dynamic libraries
 ** testing if installed package can be loaded from final location
 ** testing if installed package keeps a record of temporary installation
 path
 * DONE (fs)
 }}}

-- 
Ticket URL: <https://trac.macports.org/ticket/66332#comment:2>
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