[MacPorts] #67251: R fails to configure on Tiger: Failed to configure R: Invalid value for configure.compiler

MacPorts noreply at macports.org
Sun Apr 16 19:48:31 UTC 2023 

#67251: R fails to configure on Tiger: Failed to configure R: Invalid value for
configure.compiler
--------------------------+------------------------
 Reporter:  barracuda156  |      Owner:  i0ntempest
     Type:  defect        |     Status:  assigned
 Priority:  Normal        |  Milestone:
Component:  ports         |    Version:  2.8.1
 Keywords:  tiger         |       Port:  R
--------------------------+------------------------
 {{{
 version:1
 :debug:clean Starting logging for R
 @4.2.3_1+builtin_lapack+cairo+gcc7+openmp+recommended+x11
 :debug:sysinfo Mac OS X 10.4.11 (darwin/8.11.0) arch powerpc
 :debug:sysinfo MacPorts 2.8.0
 :debug:sysinfo Xcode 2.5, CLT none
 :debug:sysinfo SDK 10.4
 :debug:sysinfo MACOSX_DEPLOYMENT_TARGET: 10.4
 :msg:clean --->  Computing dependencies for R:info:clean .:debug:clean R
 has no conflicts
 :debug:clean Searching for dependency: pkgconfig
 :debug:clean Found Dependency: receipt exists for pkgconfig
 :debug:clean Searching for dependency: gcc7
 :debug:clean Found Dependency: receipt exists for gcc7
 :debug:clean Searching for dependency: readline
 :debug:clean Found Dependency: receipt exists for readline
 :debug:clean Searching for dependency: icu
 :debug:clean Found Dependency: receipt exists for icu
 :debug:clean Searching for dependency: libiconv
 :debug:clean Found Dependency: receipt exists for libiconv
 :debug:clean Searching for dependency: zlib
 :debug:clean Found Dependency: receipt exists for zlib
 :debug:clean Searching for dependency: pcre
 :debug:clean Found Dependency: receipt exists for pcre
 :debug:clean Searching for dependency: pcre2
 :debug:clean Found Dependency: receipt exists for pcre2
 :debug:clean Searching for dependency: libjpeg-turbo
 :debug:clean Found Dependency: receipt exists for libjpeg-turbo
 :debug:clean Searching for dependency: tiff
 :debug:clean Found Dependency: receipt exists for tiff
 :debug:clean Searching for dependency: libpng
 :debug:clean Found Dependency: receipt exists for libpng
 :debug:clean Searching for dependency: curl
 :debug:clean Found Dependency: receipt exists for curl
 :debug:clean Searching for dependency: less
 :debug:clean Found Dependency: receipt exists for less
 :debug:clean Searching for dependency: texinfo
 :debug:clean Found Dependency: receipt exists for texinfo
 :debug:clean Searching for dependency: bzip2
 :debug:clean Found Dependency: receipt exists for bzip2
 :debug:clean Searching for dependency: gzip
 :debug:clean Found Dependency: receipt exists for gzip
 :debug:clean Searching for dependency: zip
 :debug:clean Found Dependency: receipt exists for zip
 :debug:clean Searching for dependency: unzip
 :debug:clean Found Dependency: receipt exists for unzip
 :debug:clean Searching for dependency: gnutar
 :debug:clean Found Dependency: receipt exists for gnutar
 :debug:clean Searching for dependency: xz
 :debug:clean Found Dependency: receipt exists for xz
 :debug:clean Searching for dependency: libgcc
 :debug:clean Found Dependency: receipt exists for libgcc
 :debug:clean Searching for dependency: cairo
 :debug:clean Found Dependency: receipt exists for cairo
 :debug:clean Searching for dependency: pango
 :debug:clean Found Dependency: receipt exists for pango
 :debug:clean Searching for dependency: glib2
 :debug:clean Found Dependency: receipt exists for glib2
 :debug:clean Searching for dependency: freetype
 :debug:clean Found Dependency: receipt exists for freetype
 :debug:clean Searching for dependency: fontconfig
 :debug:clean Found Dependency: receipt exists for fontconfig
 :debug:clean Searching for dependency: gettext-runtime
 :debug:clean Found Dependency: receipt exists for gettext-runtime
 :debug:clean Searching for dependency: xorg-libsm
 :debug:clean Found Dependency: receipt exists for xorg-libsm
 :debug:clean Searching for dependency: xorg-libice
 :debug:clean Found Dependency: receipt exists for xorg-libice
 :debug:clean Searching for dependency: xorg-libX11
 :debug:clean Found Dependency: receipt exists for xorg-libX11
 :debug:clean Searching for dependency: xorg-libXt
 :debug:clean Found Dependency: receipt exists for xorg-libXt
 :debug:clean Searching for dependency: legacy-support
 :debug:clean Found Dependency: receipt exists for legacy-support
 :debug:main Executing org.macports.main (R)
 :debug:main dropping privileges: euid changed to 502, egid changed to 500.
 :debug:archivefetch archivefetch phase started at Mon Apr 17 03:21:59 CST
 2023
 :msg:archivefetch --->  Fetching archive for R
 :debug:archivefetch Executing proc-pre-org.macports.archivefetch-
 archivefetch-0
 :debug:archivefetch Executing org.macports.archivefetch (R)
 :debug:archivefetch euid/egid changed to: 0/0
 :debug:archivefetch chowned /opt/local/var/macports/incoming to macports
 :debug:archivefetch euid/egid changed to: 502/500
 :info:archivefetch --->
 R-4.2.3_1+builtin_lapack+cairo+gcc7+openmp+recommended+x11.darwin_8.ppc.tbz2
 doesn't seem to exist in /opt/local/var/macports/incoming/verified
 :msg:archivefetch --->  Attempting to fetch
 R-4.2.3_1+builtin_lapack+cairo+gcc7+openmp+recommended+x11.darwin_8.ppc.tbz2
 from http://packages.macports.org/R
 :debug:archivefetch Fetching archive failed: The requested URL returned
 error: 404
 :msg:archivefetch --->  Attempting to fetch
 R-4.2.3_1+builtin_lapack+cairo+gcc7+openmp+recommended+x11.darwin_8.ppc.tbz2
 from http://nue.de.packages.macports.org/R
 :debug:archivefetch Fetching archive failed: The requested URL returned
 error: 404
 :msg:archivefetch --->  Attempting to fetch
 R-4.2.3_1+builtin_lapack+cairo+gcc7+openmp+recommended+x11.darwin_8.ppc.tbz2
 from http://atl.us.packages.macports.org/R
 :debug:archivefetch Fetching archive failed: The requested URL returned
 error: 404
 :debug:archivefetch Privilege de-escalation not attempted as not running
 as root.
 :debug:fetch fetch phase started at Mon Apr 17 03:22:02 CST 2023
 :notice:fetch --->  Fetching distfiles for R
 :debug:fetch Executing proc-pre-org.macports.fetch-fetch-0
 :debug:fetch Executing org.macports.fetch (R)
 :info:fetch --->  R-4.2.3.tar.gz does not exist in
 /opt/local/var/macports/distfiles/R
 :notice:fetch --->  Attempting to fetch R-4.2.3.tar.gz from
 https://cran.rstudio.com/src/base/R-4/
 :debug:fetch Privilege de-escalation not attempted as not running as root.
 :debug:checksum checksum phase started at Mon Apr 17 03:23:22 CST 2023
 :notice:checksum --->  Verifying checksums for R
 :debug:checksum Executing org.macports.checksum (R)
 :info:checksum --->  Checksumming R-4.2.3.tar.gz
 :debug:checksum Calculated (rmd160) is
 c46686207d55e9f6fcd52049a8f1b7c542ad0483
 :debug:checksum Correct (rmd160) checksum for R-4.2.3.tar.gz
 :debug:checksum Calculated (sha256) is
 55e4a9a6d43be314e2c03d0266a6fa5444afdce50b303bfc3b82b3979516e074
 :debug:checksum Correct (sha256) checksum for R-4.2.3.tar.gz
 :debug:checksum Calculated (size) is 34010655
 :debug:checksum Correct (size) checksum for R-4.2.3.tar.gz
 :debug:checksum Privilege de-escalation not attempted as not running as
 root.
 :debug:extract extract phase started at Mon Apr 17 03:23:24 CST 2023
 :notice:extract --->  Extracting R
 :debug:extract Executing org.macports.extract (R)
 :info:extract --->  Extracting R-4.2.3.tar.gz
 :debug:extract setting option extract.args to
 '/opt/local/var/macports/distfiles/R/R-4.2.3.tar.gz'
 :debug:extract Environment:
 :debug:extract CC_PRINT_OPTIONS='YES'
 :debug:extract
 CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/.CC_PRINT_OPTIONS'
 :debug:extract CPATH='/opt/local/include'
 :debug:extract CPLUS_INCLUDE_PATH='/opt/local/include/LegacySupport'
 :debug:extract C_INCLUDE_PATH='/opt/local/include/LegacySupport'
 :debug:extract DEVELOPER_DIR='/Developer'
 :debug:extract LIBRARY_PATH='/opt/local/lib'
 :debug:extract MACOSX_DEPLOYMENT_TARGET='10.4'
 :debug:extract
 MACPORTS_LEGACY_SUPPORT_CPPFLAGS='-isystem/opt/local/include/LegacySupport'
 :debug:extract MACPORTS_LEGACY_SUPPORT_ENABLED='1'
 :debug:extract MACPORTS_LEGACY_SUPPORT_LDFLAGS='-L/opt/local/lib
 -lMacportsLegacySupport'
 :debug:extract OBJCPLUS_INCLUDE_PATH='/opt/local/include/LegacySupport'
 :debug:extract OBJC_INCLUDE_PATH='/opt/local/include/LegacySupport'
 :info:extract Executing:  cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work"
 && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/R/R-4.2.3.tar.gz'
 | /usr/bin/gnutar --no-same-owner -xf -
 :debug:extract system:  cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work"
 && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/R/R-4.2.3.tar.gz'
 | /usr/bin/gnutar --no-same-owner -xf -
 :info:extract /usr/bin/gnutar: Read 6656 bytes from -
 :debug:extract euid/egid changed to: 0/0
 :debug:extract chowned
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work
 to macports
 :debug:extract euid/egid changed to: 502/500
 :debug:extract Privilege de-escalation not attempted as not running as
 root.
 :debug:patch patch phase started at Mon Apr 17 03:23:41 CST 2023
 :debug:patch Executing org.macports.patch (R)
 :notice:patch --->  Applying patches to R
 :info:patch --->  Applying patch-curl.diff
 :debug:patch Environment:
 :debug:patch CC_PRINT_OPTIONS='YES'
 :debug:patch
 CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/.CC_PRINT_OPTIONS'
 :debug:patch CPATH='/opt/local/include'
 :debug:patch DEVELOPER_DIR='/Developer'
 :debug:patch LIBRARY_PATH='/opt/local/lib'
 :debug:patch MACOSX_DEPLOYMENT_TARGET='10.4'
 :info:patch Executing:  cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/R-4.2.3"
 && /usr/bin/patch -p0 <
 '/opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/math/R/files
 /patch-curl.diff'
 :debug:patch system:  cd
 "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/R-4.2.3"
 && /usr/bin/patch -p0 <
 '/opt/local/var/macports/sources/rsync.macports.org/macports/release/tarballs/ports/math/R/files
 /patch-curl.diff'
 :info:patch patching file configure
 :debug:patch Executing proc-post-org.macports.patch-patch-0
 :info:patch --->  Patching Rscript.c:
 s|R_HOME|"/opt/local/Library/Frameworks/R.framework/Versions/4.2/Resources"|
 :debug:patch Executing reinplace: /usr/bin/sed
 s|R_HOME|\"/opt/local/Library/Frameworks/R.framework/Versions/4.2/Resources\"|
 </opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/R-4.2.3/src/unix/Rscript.c
 >@file14
 :debug:patch euid/egid changed to: 0/0
 :debug:patch chowned
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/R-4.2.3/src/unix/Rscript.c
 to macports
 :debug:patch euid/egid changed to: 502/500
 :debug:patch euid/egid changed to: 0/0
 :debug:patch setting attributes on
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/R-4.2.3/src/unix/Rscript.c
 :debug:patch euid/egid changed to: 502/500
 :info:patch --->  Patching Defn.h: s|<libintl.h>|"libintl.h"|
 :debug:patch Executing reinplace: /usr/bin/sed
 s|<libintl.h>|\"libintl.h\"|
 </opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/R-4.2.3/src/include/Defn.h
 >@file14
 :debug:patch euid/egid changed to: 0/0
 :debug:patch chowned
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/R-4.2.3/src/include/Defn.h
 to macports
 :debug:patch euid/egid changed to: 502/500
 :debug:patch euid/egid changed to: 0/0
 :debug:patch setting attributes on
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/R-4.2.3/src/include/Defn.h
 :debug:patch euid/egid changed to: 502/500
 :info:patch --->  Patching localtime.c:
 s|/var/db/timezone/zoneinfo|/usr/share/zoneinfo|g
 :debug:patch Executing reinplace: /usr/bin/sed
 s|/var/db/timezone/zoneinfo|/usr/share/zoneinfo|g
 </opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/R-4.2.3/src/extra/tzone/localtime.c
 >@file14
 :debug:patch euid/egid changed to: 0/0
 :debug:patch chowned
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/R-4.2.3/src/extra/tzone/localtime.c
 to macports
 :debug:patch euid/egid changed to: 502/500
 :debug:patch euid/egid changed to: 0/0
 :debug:patch setting attributes on
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/R-4.2.3/src/extra/tzone/localtime.c
 :debug:patch euid/egid changed to: 502/500
 :info:patch --->  Patching timezones.Rd:
 s|/var/db/timezone/zoneinfo|/usr/share/zoneinfo|g
 :debug:patch Executing reinplace: /usr/bin/sed
 s|/var/db/timezone/zoneinfo|/usr/share/zoneinfo|g
 </opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/R-4.2.3/src/library/base/man/timezones.Rd
 >@file14
 :debug:patch euid/egid changed to: 0/0
 :debug:patch chowned
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/R-4.2.3/src/library/base/man/timezones.Rd
 to macports
 :debug:patch euid/egid changed to: 502/500
 :debug:patch euid/egid changed to: 0/0
 :debug:patch setting attributes on
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/R-4.2.3/src/library/base/man/timezones.Rd
 :debug:patch euid/egid changed to: 502/500
 :info:patch --->  Patching datetime.R:
 s|/var/db/timezone/zoneinfo|/usr/share/zoneinfo|g
 :debug:patch Executing reinplace: /usr/bin/sed
 s|/var/db/timezone/zoneinfo|/usr/share/zoneinfo|g
 </opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/R-4.2.3/src/library/base/R/datetime.R
 >@file14
 :debug:patch euid/egid changed to: 0/0
 :debug:patch chowned
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/R-4.2.3/src/library/base/R/datetime.R
 to macports
 :debug:patch euid/egid changed to: 502/500
 :debug:patch euid/egid changed to: 0/0
 :debug:patch setting attributes on
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/work/R-4.2.3/src/library/base/R/datetime.R
 :debug:patch euid/egid changed to: 502/500
 :debug:patch Privilege de-escalation not attempted as not running as root.
 :debug:configure configure phase started at Mon Apr 17 03:23:42 CST 2023
 :notice:configure --->  Configuring R
 :error:configure Failed to configure R: Invalid value for
 configure.compiler:
 :debug:configure Error code: NONE
 :debug:configure Backtrace: Invalid value for configure.compiler:
 :debug:configure     while executing
 :debug:configure "[ditem_key $ditem prerun] $targetname"
 :error:configure See
 /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_R/R/main.log
 for details.
 }}}

-- 
Ticket URL: <https://trac.macports.org/ticket/67251>
MacPorts <https://www.macports.org/>
Ports system for macOS

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