[MacPorts] #71509: dcm2niix: avoid cloning a duplicate of openjpeg during the build

[MacPorts]

#71509: dcm2niix: avoid cloning a duplicate of openjpeg during the build
--------------------------+----------------------
 Reporter:  barracuda156  |      Owner:  eborisch
     Type:  defect        |     Status:  assigned
 Priority:  Normal        |  Milestone:
Component:  ports         |    Version:  2.10.5
 Keywords:                |       Port:  dcm2niix
--------------------------+----------------------
 The port claims to depend on `openjpeg`, yet it trying to clone the repo
 during the build:
 {{{
 [  5%] Creating directories for 'openjpeg'
 /opt/local/bin/cmake -Dcfgdir= -P
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_dcm2niix/dcm2niix/work/build
 /openjpeg-prefix/tmp/openjpeg-mkdirs.cmake
 [ 11%] Generating man pages with Sphinx
 cd
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_dcm2niix/dcm2niix/work/build/docs
 && /opt/local/bin/sphinx-build-3.12 -b man -c
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_dcm2niix/dcm2niix/work/build/docs/build
 -d
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_dcm2niix/dcm2niix/work/build/docs/doctrees
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_dcm2niix/dcm2niix/work/dcm2niix-1.0.20241208/docs/source
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_dcm2niix/dcm2niix/work/build/docs/man
 /opt/local/bin/cmake -E touch
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_dcm2niix/dcm2niix/work/build
 /openjpeg-prefix/src/openjpeg-stamp/openjpeg-mkdir
 [ 17%] Performing download step (git clone) for 'openjpeg'
 /opt/local/bin/cmake -DCMAKE_MESSAGE_LOG_LEVEL=VERBOSE -P
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_dcm2niix/dcm2niix/work/build
 /openjpeg-prefix/tmp/openjpeg-gitclone.cmake
 Cloning into 'openjpeg'...
 Running Sphinx v8.1.3
 WARNING: Invalid configuration value found: 'language = None'. Update your
 configuration to a valid language code. Falling back to 'en' (English).
 loading translations [en]... done
 making output directory... done
 WARNING: html_static_path entry '_static' does not exist
 Converting `source_suffix = '.rst'` to `source_suffix = {'.rst':
 'restructuredtext'}`.
 building [mo]: targets for 0 po files that are out of date
 writing output...
 building [man]: all manpages
 updating environment: [new config] 3 added, 0 changed, 0 removed
 reading sources... [ 33%] dcm2niibatch
 reading sources... [ 67%] dcm2niix
 reading sources... [100%] index

 looking for now-outdated files... none found
 pickling environment... done
 checking consistency... done
 preparing documents... done
 copying assets...
 copying assets: done
 writing... dcm2niix.1 {
 } dcm2niibatch.1 {
 } done
 build succeeded, 2 warnings.

 The manual pages are in man.
 make[2]: Leaving directory
 `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_science_dcm2niix/dcm2niix/work/build'
 [ 17%] Built target build-man
 error: RPC failed; curl 92 HTTP/2 stream 5 was not closed cleanly: CANCEL
 (err 8)
 error: 2929 bytes of body are still expected
 fetch-pack: unexpected disconnect while reading sideband packet
 fatal: early EOF
 fatal: fetch-pack: invalid index-pack output
 Cloning into 'openjpeg'...
 error: RPC failed; curl 92 HTTP/2 stream 5 was not closed cleanly: CANCEL
 (err 8)
 error: 2808 bytes of body are still expected
 fetch-pack: unexpected disconnect while reading sideband packet
 fatal: early EOF
 fatal: fetch-pack: invalid index-pack output
 Cloning into 'openjpeg'...
 }}}

 Is it possible to avoid this?

-- 
Ticket URL: <https://trac.macports.org/ticket/71509>
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