[MacPorts] #69295: lapack @3.12.0_0+gfortran+openblas (and +accelerate) fails to build on MacOS 10.15 on x86_64
MacPorts
noreply at macports.org
Wed Feb 7 12:29:54 UTC 2024
#69295: lapack @3.12.0_0+gfortran+openblas (and +accelerate) fails to build on
MacOS 10.15 on x86_64
----------------------+----------------------
Reporter: Gandoon | Owner: tenomoto
Type: defect | Status: assigned
Priority: Normal | Milestone:
Component: ports | Version: 2.9.1
Resolution: | Keywords: catalina
Port: lapack |
----------------------+----------------------
Old description:
> Trying to upgrade `lapack +gfortran +openblas` from @3.11.0_1 to 3.12.0_0
> on a legacy system, MacOS 10.15.7. Last successful build was the one I am
> trying to upgrade from, built on 22 January 2024. See an excerpt from the
> attached log below.
> {{{
> . . .
> :info:build "_ztrsm_64_", referenced from:
> :info:build _cblas_ztrsm_64 in cblas_ztrsm.c.o
> :info:build "_ztrsv_64_", referenced from:
> :info:build _cblas_ztrsv_64 in cblas_ztrsv.c.o
> :info:build ld: symbol(s) not found for architecture x86_64
> :info:build clang: error: linker command failed with exit code 1 (use -v
> to see invocation)
> :info:build make[2]: *** [lib/libcblas.3.12.0.dylib] Error 1
> :info:build make[2]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_lapack/lapack/work/build'
> :info:build make[1]: *** [CBLAS/src/CMakeFiles/cblas.dir/all] Error 2
> :info:build make[1]: *** Waiting for unfinished jobs....
> :info:build [ 9%] Building Fortran object
> SRC/CMakeFiles/lapack.dir/slarfb.f.o
> :info:build cd
> /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_lapack/lapack/work/build/SRC
> && /opt/local/bin/ccache /o
> pt/local/bin/gfortran-mp-13 -Dlapack_EXPORTS -pipe -Os -m64 -frecursive
> -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX10.15.sdk -fPIC
> -c /opt/local/var/macports/build/_
> opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_lapack/lapack/work/lapack-3.12.0/SRC/slarfb.f
> -o CMakeFiles/lapack.dir/slarfb.f.o
> . . .
> [ 47%] Built target lapack
> make[1]: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_lapack/lapack/work/build'
> make: *** [all] Error 2
> make: Leaving directory
> `/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_lapack/lapack/work/build'
> Command failed: cd
> "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_lapack/lapack/work/build"
> && /usr/bin/make -j8 -w all VERBOSE=ON
> Exit code: 2
> Error: Failed to build lapack: command execution failed
> Error: See
> /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_lapack/lapack/main.log
> for details.
> Error: Follow https://guide.macports.org/#project.tickets if you believe
> there is a bug.
> }}}
> As can be seen, quite early on in the build process some symbols cannot
> be found. After that a bunch more is built successfully before the whole
> thing grinds to an unrecoverable halt.
>
> Does anyone have a suggestion as for what to do here? It is not clear to
> me exactly what is the problem. I did also try using `+accelerate`
> instead, despite being uncertain whether this will negatively impact
> ports depending on `lapack`, but the error persists. I finally also tried
> using `+gcc13` instead of `+gfortran`but as expected, that was equally
> unsuccessful.
>
> I noticed that there actually seems to be another, older active ticket
> that seems to be related, using `+accelerate +gcc10`: #67262 but with the
> same error message.
New description:
Trying to upgrade `lapack +gfortran +openblas` from @3.11.0_1 to 3.12.0_0
on a legacy system, MacOS 10.15.7. Last successful build was the one I am
trying to upgrade from, built on 22 January 2024. See an excerpt from the
attached log below.
{{{
. . .
:info:build "_ztrsm_64_", referenced from:
:info:build _cblas_ztrsm_64 in cblas_ztrsm.c.o
:info:build "_ztrsv_64_", referenced from:
:info:build _cblas_ztrsv_64 in cblas_ztrsv.c.o
:info:build ld: symbol(s) not found for architecture x86_64
:info:build clang: error: linker command failed with exit code 1 (use -v
to see invocation)
:info:build make[2]: *** [lib/libcblas.3.12.0.dylib] Error 1
:info:build make[2]: Leaving directory
`/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_lapack/lapack/work/build'
:info:build make[1]: *** [CBLAS/src/CMakeFiles/cblas.dir/all] Error 2
:info:build make[1]: *** Waiting for unfinished jobs....
:info:build [ 9%] Building Fortran object
SRC/CMakeFiles/lapack.dir/slarfb.f.o
:info:build cd
/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_lapack/lapack/work/build/SRC
&& /opt/local/bin/ccache /o
pt/local/bin/gfortran-mp-13 -Dlapack_EXPORTS -pipe -Os -m64 -frecursive
-isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX10.15.sdk -fPIC
-c /opt/local/var/macports/build/_
opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_lapack/lapack/work/lapack-3.12.0/SRC/slarfb.f
-o CMakeFiles/lapack.dir/slarfb.f.o
. . .
[ 47%] Built target lapack
make[1]: Leaving directory
`/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_lapack/lapack/work/build'
make: *** [all] Error 2
make: Leaving directory
`/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_lapack/lapack/work/build'
Command failed: cd
"/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_lapack/lapack/work/build"
&& /usr/bin/make -j8 -w all VERBOSE=ON
Exit code: 2
Error: Failed to build lapack: command execution failed
Error: See
/opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_lapack/lapack/main.log
for details.
Error: Follow https://guide.macports.org/#project.tickets if you believe
there is a bug.
}}}
As can be seen, quite early on in the build process some symbols cannot be
found. After that a bunch more is built successfully before the whole
thing grinds to an unrecoverable halt.
Does anyone have a suggestion as for what to do here? It is not clear to
me exactly what is the problem. I did also try using `+accelerate`
instead, despite being uncertain whether this will negatively impact ports
depending on `lapack`, but the error persists. I finally also tried using
`+gcc13` instead of `+gfortran`but as expected, that was equally
unsuccessful.
I noticed that there actually seems to be another, older active ticket
that seems to be related, using `+accelerate +gcc10`: #67262 but with a
similar error message (different symbol, but the same libcblas is
involved).
--
Comment (by Gandoon):
My recent edit of the ticket just clarified that it was not exactly the
same issue as in #67262, but I expect it is similar enough to mention.
--
Ticket URL: <https://trac.macports.org/ticket/69295#comment:2>
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