[MacPorts] #69403: superlu_dist @ 8.2.1_0+gcc10+openblas+openmpi : Undefined symbols

MacPorts noreply at macports.org
Mon Feb 26 14:55:02 UTC 2024


#69403: superlu_dist @ 8.2.1_0+gcc10+openblas+openmpi : Undefined symbols
------------------------------+--------------------------
 Reporter:  lazersos          |      Owner:  (none)
     Type:  defect            |     Status:  new
 Priority:  Normal            |  Milestone:
Component:  ports             |    Version:  2.9.1
 Keywords:  superlu_dist mpi  |       Port:  superlu_dist
------------------------------+--------------------------
 The superlu_dist port is failing to compile due to a werid MPI issue it
 appears:

 {{{
 install superlu_dist +gcc10+openblas+openmpi-accelerate
 --->  Computing dependencies for superlu_dist
 --->  Fetching archive for superlu_dist
 --->  Attempting to fetch
 superlu_dist-8.2.1_0+gcc10+openblas+openmpi.darwin_21.x86_64.tbz2 from
 https://cph.dk.packages.macports.org/superlu_dist
 --->  Attempting to fetch
 superlu_dist-8.2.1_0+gcc10+openblas+openmpi.darwin_21.x86_64.tbz2 from
 https://nue.de.packages.macports.org/superlu_dist
 --->  Attempting to fetch
 superlu_dist-8.2.1_0+gcc10+openblas+openmpi.darwin_21.x86_64.tbz2 from
 https://fra.de.packages.macports.org/superlu_dist
 --->  Fetching distfiles for superlu_dist
 --->  Verifying checksums for superlu_dist
 --->  Extracting superlu_dist
 --->  Configuring superlu_dist
 Error: Failed to configure superlu_dist: consult
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_superlu_dist/superlu_dist/work/build/CMakeFiles/CMakeError.log
 Error: Failed to configure superlu_dist: configure failure: command
 execution failed
 Error: See
 /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_superlu_dist/superlu_dist/main.log
 for details.
 Error: Follow https://guide.macports.org/#project.tickets if you believe
 there is a bug.
 Error: Processing of port superlu_dist failed
 }}}

 The actual error in the log file is:
 {{{
 Run Build Command(s):/usr/bin/make -f Makefile cmTC_7da32/fast &&
 /Library/Developer/CommandLineTools/usr/bin/make  -f
 CMakeFiles/cmTC_7da32.dir/build.make CMakeFiles/cmTC_7da32.dir/build
 Building CXX object CMakeFiles/cmTC_7da32.dir/test_mpi.cpp.o
 /opt/local/bin/mpicxx-openmpi-gcc10   -pipe -Os -DNDEBUG
 -I/opt/local/include
 -isysroot/Library/Developer/CommandLineTools/SDKs/MacOSX12.sdk  -arch
 x86_64 -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX12.sdk
 -mmacosx-version-min=12.0 -std=gnu++11 -o
 CMakeFiles/cmTC_7da32.dir/test_mpi.cpp.o -c
 /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_macports_release_tarballs_ports_math_superlu_dist/superlu_dist/work/build/CMakeFiles/FindMPI/test_mpi.cpp
 Linking CXX executable cmTC_7da32
 /opt/local/bin/cmake -E cmake_link_script
 CMakeFiles/cmTC_7da32.dir/link.txt --verbose=1
 /opt/local/bin/mpicxx-openmpi-gcc10 -pipe -Os -DNDEBUG
 -I/opt/local/include
 -isysroot/Library/Developer/CommandLineTools/SDKs/MacOSX12.sdk  -arch
 x86_64 -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX12.sdk
 -mmacosx-version-min=12.0 -Wl,-search_paths_first
 -Wl,-headerpad_max_install_names -L/opt/local/lib
 -Wl,-headerpad_max_install_names -stdlib=libc++
 -Wl,-rpath,/opt/local/lib/libgcc
 -Wl,-syslibroot,/Library/Developer/CommandLineTools/SDKs/MacOSX12.sdk
 -L/opt/local/lib CMakeFiles/cmTC_7da32.dir/test_mpi.cpp.o -o cmTC_7da32
 /opt/local/lib/openmpi-gcc10/libmpi_cxx.dylib /opt/local/lib/openmpi-
 gcc10/libmpi.dylib
 Undefined symbols for architecture x86_64:
   "__ZNSt8ios_base4InitC1Ev", referenced from:
       __GLOBAL__sub_I_test_mpi.cpp in test_mpi.cpp.o
   "__ZNSt8ios_base4InitD1Ev", referenced from:
       __GLOBAL__sub_I_test_mpi.cpp in test_mpi.cpp.o
 ld: symbol(s) not found for architecture x86_64
 collect2: error: ld returned 1 exit status
 make[1]: *** [cmTC_7da32] Error 1
 make: *** [cmTC_7da32/fast] Error 2
 }}}

-- 
Ticket URL: <https://trac.macports.org/ticket/69403>
MacPorts <https://www.macports.org/>
Ports system for macOS


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