[MacPorts] #70096: bali-phy fails to build with gcc-13: error: 'bitset' has not been declared in 'std'

MacPorts noreply at macports.org
Tue May 28 07:02:33 UTC 2024


#70096: bali-phy fails to build with gcc-13: error: 'bitset' has not been declared
in 'std'
--------------------------+----------------------
 Reporter:  barracuda156  |      Owner:  (none)
     Type:  defect        |     Status:  new
 Priority:  Normal        |  Milestone:
Component:  ports         |    Version:  2.9.3
 Keywords:                |       Port:  bali-phy
--------------------------+----------------------
 {{{
 [106/295] /opt/local/bin/g++-mp-13 -Isrc/libbaliphy.a.p -Isrc -I../BAli-
 Phy-3.6.1/src -I. -I../BAli-Phy-3.6.1 -I../BAli-Phy-3.6.1/src/util/include
 -I/opt/local/libexec/boost/1.81/include -I/opt/local/include
 -fdiagnostics-color=always -DNDEBUG -Wall -Winvalid-pch -Wextra -Wpedantic
 -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized
 -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-
 show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros
 -DNDEBUG_DP -fvisibility=default -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0
 -arch ppc -isystem/opt/local/include/eigen3 -DBOOST_RANDOM_DYN_LINK
 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1
 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_ALL_NO_LIB -MD -MQ
 src/libbaliphy.a.p/dp_hmm.cc.o -MF src/libbaliphy.a.p/dp_hmm.cc.o.d -o
 src/libbaliphy.a.p/dp_hmm.cc.o -c ../BAli-Phy-3.6.1/src/dp/hmm.cc
 FAILED: src/libbaliphy.a.p/dp_hmm.cc.o
 /opt/local/bin/g++-mp-13 -Isrc/libbaliphy.a.p -Isrc -I../BAli-
 Phy-3.6.1/src -I. -I../BAli-Phy-3.6.1 -I../BAli-Phy-3.6.1/src/util/include
 -I/opt/local/libexec/boost/1.81/include -I/opt/local/include
 -fdiagnostics-color=always -DNDEBUG -Wall -Winvalid-pch -Wextra -Wpedantic
 -std=c++17 -O3 -DHAVE_CONFIG_H -Wno-sign-compare -Wno-maybe-uninitialized
 -Woverloaded-virtual -Wstrict-aliasing -Wno-unknown-pragmas -fdiagnostics-
 show-template-tree -funroll-loops -fno-math-errno -fno-signed-zeros
 -DNDEBUG_DP -fvisibility=default -pipe -Os -D_GLIBCXX_USE_CXX11_ABI=0
 -arch ppc -isystem/opt/local/include/eigen3 -DBOOST_RANDOM_DYN_LINK
 -DBOOST_SYSTEM_DYN_LINK=1 -DBOOST_FILESYSTEM_DYN_LINK=1
 -DBOOST_CHRONO_DYN_LINK=1 -DBOOST_ALL_NO_LIB -MD -MQ
 src/libbaliphy.a.p/dp_hmm.cc.o -MF src/libbaliphy.a.p/dp_hmm.cc.o.d -o
 src/libbaliphy.a.p/dp_hmm.cc.o -c ../BAli-Phy-3.6.1/src/dp/hmm.cc
 ../BAli-Phy-3.6.1/src/dp/hmm.cc:69:12: error: 'bitset' has not been
 declared in 'std'
    69 | using std::bitset;
       |            ^~~~~~
 }}}

-- 
Ticket URL: <https://trac.macports.org/ticket/70096>
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