Re: [MacPorts] #72485: R-nlme - Unable to build - ERROR: dependency ‘lattice’ is not available for package ‘nlme’
MacPorts
noreply at macports.org
Thu May 15 13:10:07 UTC 2025
#72485: R-nlme - Unable to build - ERROR: dependency ‘lattice’ is not available for
package ‘nlme’
---------------------+--------------------
Reporter: RobK88 | Owner: (none)
Type: defect | Status: new
Priority: Normal | Milestone:
Component: ports | Version: 2.10.7
Resolution: | Keywords:
Port: R-nlme |
---------------------+--------------------
Comment (by RobK88):
It looks like it might be a circular dependency issue:
{{{
---> Found 27 broken files, matching files to ports
---> Found 22 broken ports, determining rebuild order
You can always run 'port rev-upgrade' again to fix errors.
The following ports will be rebuilt:
R-foreign @0.8-87
R-KernSmooth @2.23-24+gcc13
R-lattice @0.22-6
R-MASS @7.3-61
R-class @7.3-22
R-nlme @3.1-166+gcc13
R-nnet @7.3-19
R-rpart @4.1.23
R-spatial @7.3-17
R-rlang @1.1.4
R-cli @3.6.3
R-Matrix @1.7-1+gcc13
R-mgcv @1.9-1+gcc13
R-survival @3.7-0
R-sys @3.4.3
R-askpass @1.2.1
R-glue @1.8.0
R-vctrs @0.6.5
R-bignum @0.3.2
R-curl @6.0.1
R-gpg @1.3.0
R-cluster @2.1.8+gcc13
Continue? [Y/n]: Y
---> Computing dependencies for R-foreign
---> Cleaning R-foreign
---> Computing dependencies for R-KernSmooth
---> Fetching archive for R-KernSmooth
---> Attempting to fetch
R-KernSmooth-2.23-24_0+gcc14.darwin_15.x86_64.tbz2 from
http://packages.macports.org/R-KernSmooth
---> Attempting to fetch
R-KernSmooth-2.23-24_0+gcc14.darwin_15.x86_64.tbz2 from
http://ywg.ca.packages.macports.org/mirror/macports/packages/R-KernSmooth
---> Attempting to fetch
R-KernSmooth-2.23-24_0+gcc14.darwin_15.x86_64.tbz2 from
http://bos.us.packages.macports.org/R-KernSmooth
---> Fetching distfiles for R-KernSmooth
---> Attempting to fetch KernSmooth_2.23-24.tar.gz from
http://distfiles.macports.org/R-KernSmooth
---> Verifying checksums for R-KernSmooth
---> Extracting R-KernSmooth
---> Configuring R-KernSmooth
---> Building R-KernSmooth
---> Staging R-KernSmooth into destroot
---> Installing R-KernSmooth @2.23-24_0+gcc14
---> Cleaning R-KernSmooth
---> Computing dependencies for R-KernSmooth
---> Deactivating R-KernSmooth @2.23-24_0+gcc13
---> Cleaning R-KernSmooth
---> Activating R-KernSmooth @2.23-24_0+gcc14
---> Cleaning R-KernSmooth
---> Computing dependencies for R-lattice
---> Cleaning R-lattice
---> Computing dependencies for R-MASS
---> Cleaning R-MASS
---> Computing dependencies for R-class
---> Cleaning R-class
---> Computing dependencies for R-nlme
---> Fetching archive for R-nlme
---> Attempting to fetch R-nlme-3.1-166_0+gcc14.darwin_15.x86_64.tbz2
from http://packages.macports.org/R-nlme
---> Attempting to fetch R-nlme-3.1-166_0+gcc14.darwin_15.x86_64.tbz2
from http://ywg.ca.packages.macports.org/mirror/macports/packages/R-nlme
---> Attempting to fetch R-nlme-3.1-166_0+gcc14.darwin_15.x86_64.tbz2
from http://bos.us.packages.macports.org/R-nlme
---> Fetching distfiles for R-nlme
---> Verifying checksums for R-nlme
---> Extracting R-nlme
---> Configuring R-nlme
---> Building R-nlme
Error: Failed to build R-nlme: command execution failed
Error: See
/opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports
.org_macports_release_tarballs_ports_R_R-nlme/R-nlme/main.log for details.
Error: rev-upgrade failed: Error rebuilding R-nlme
Error: Follow https://guide.macports.org/#project.tickets if you believe
there is a bug.
---> Some of the ports you installed have notes:
R has the following notes:
Some R packages using OpenMP may require additional flags in the
Makevar file (e.g. data.table) to build with OpenMP support.
Please consult package documentation.
}}}
--
Ticket URL: <https://trac.macports.org/ticket/72485#comment:1>
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