error during activate step
Michael Thon
mrt5 at mac.com
Fri Oct 13 04:48:22 PDT 2006
I'm trying to write a portfile for a new package but I get an error
during the activate step. There's probably a bug in my portfile but
I cant find it. Can anyone have a quick look at this? Here is the
output of 'sudo port install MUMmer' and at the end of the email is
my Portfile. Many thanks.
DEBUG: Executing com.apple.install (MUMmer)
couldn't change working directory to "/opt/local/var/db/dports/build/
_Users_mike_darwinports_dports_science_MUMmer/work/destroot": no such
file or directory
DEBUG: Executing com.apple.activate (MUMmer)
---> Activating MUMmer 3.19_0
Error: Target com.apple.activate returned: Image error: Source file /
opt/local/var/db/dports/software/MUMmer/3.19_0 does not appear to
exist (cannot lstat it). Unable to activate port MUMmer.
Warning: the following items did not execute (for MUMmer):
com.apple.activate
Error: Status 1 encountered during processing.
--------Portfile--------
# $Id: $
PortSystem 1.0
name MUMmer
version 3.19
revision 0
distfiles ${name}${version}.tar.gz
description MUMmer is a system for rapidly aligning entire genomes,
whether in \
complete or draft form.
long_description \
MUMmer is a system for rapidly aligning entire genomes, whether in
complete or draft \
form. For example, MUMmer 3.0 can find all 20-basepair or longer
exact matches between \
a pair of 5-megabase genomes in 13.7 seconds, using 78 MB of memory,
on a 2.4 GHz Linux \
desktop computer. MUMmer can also align incomplete genomes. it
handles the 100s or 1000s \
of contigs from a shotgun \
sequencing project with ease, and will align them to another set of
contigs or a genome \
using the NUCmer program included with the system. If the species are
too divergent for \
DNA sequence alignment to detect similarity, then the PROmer program
can generate \
alignments based upon the six-frame translations of both input
sequences.
maintainers mrt5 at mac.com
categories science
platforms darwin
homepage http://mummer.sourceforge.net
master_sites sourceforge:mummer
checksums md5 7e0aa1c7da68c31b66fda9687171d9ff
worksrcdir ${name}${version}
use_configure no
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