SciPy install error
Christopher W. MacMinn
cmac at MIT.EDU
Wed Jul 18 11:32:34 PDT 2007
> I'm trying to get up-and-running with Python for scientific-
> computing purposes, and I'm running into an error with installation
> of the SciPy package:
>
> ---> Building py-scipy with target build
> Error: Target org.macports.build returned: shell command " cd "/opt/
> local/var/macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_pytho
> n_py-scipy/work/scipy-0.5.2" && /opt/local/bin/python2.4 setup.py
> build " returned error 1
> Command output: warnings.warn(self.notfounderror.__doc__)
> NOT AVAILABLE
>
> non-existing path in 'Lib/maxentropy': 'doc'
> Traceback (most recent call last):
> File "setup.py", line 55, in ?
> setup_package()
> File "setup.py", line 47, in setup_package
> configuration=configuration )
> File "/opt/local/lib/python2.4/site-packages/numpy/distutils/
> core.py", line 142, in setup
> config = configuration()
> File "setup.py", line 19, in configuration
> config.add_subpackage('Lib')
> File "/opt/local/lib/python2.4/site-packages/numpy/distutils/
> misc_util.py", line 772, in add_subpackage
> caller_level = 2)
> File "/opt/local/lib/python2.4/site-packages/numpy/distutils/
> misc_util.py", line 755, in get_subpackage
> caller_level = caller_level + 1)
> File "/opt/local/lib/python2.4/site-packages/numpy/distutils/
> misc_util.py", line 702, in _get_configuration_from_setup_py
> config = setup_module.configuration(*args)
> File "/opt/local/var/macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_pytho
> n_py-scipy/work/scipy-0.5.2/Lib/setup.py", line 15, in configuration
> config.add_subpackage('odr')
> File "/opt/local/lib/python2.4/site-packages/numpy/distutils/
> misc_util.py", line 772, in add_subpackage
> caller_level = 2)
> File "/opt/local/lib/python2.4/site-packages/numpy/distutils/
> misc_util.py", line 755, in get_subpackage
> caller_level = caller_level + 1)
> File "/opt/local/lib/python2.4/site-packages/numpy/distutils/
> misc_util.py", line 687, in _get_configuration_from_setup_py
> ('.py', 'U', 1))
> File "Lib/odr/setup.py", line 9, in ?
> from numpy.distutils.misc_util import get_path, Configuration,
> dot_join
> ImportError: cannot import name get_path
>
> Error: Status 1 encountered during processing.
OK, I seem to have solved that problem -- apparently it is a known
issue with NumPy:
http://www.nabble.com/Re%3A-Failed%3A-phase-compiling%3A-scipy-
py25-0.5.2-3-failed-p11024299.html
Accordingly, I replaced the call to get_path with a call to
get_path_from_frame in /opt/local/var/macports/build/
_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_
py-scipy/work/scipy-0.5.2/Lib/odr/setup.py
But... I now have a new problem (which is hopefully not a result of
my "fix" for the old problem). The new error is as follows:
---> Building py-scipy with target build
Error: Target org.macports.build returned: shell command " cd "/opt/
local/var/macports/build/
_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_
py-scipy/work/scipy-0.5.2" && /opt/local/bin/python2.4 setup.py build
" returned error 1
Command output: _PyImport_ImportModule
_PyInt_Type
_PyModule_GetDict
_PyNumber_Int
_PyObject_GetAttrString
_PySequence_Check
_PySequence_GetItem
_PyString_FromString
_PyString_Type
_PyType_IsSubtype
_PyType_Type
_Py_BuildValue
_Py_InitModule4
__Py_NoneStruct
_PyCObject_FromVoidPtr
_PyDict_DelItemString
_PyDict_GetItemString
_PyDict_New
_PyExc_AttributeError
_PyExc_TypeError
_PyExc_ValueError
_PyObject_Free
_PyObject_Str
_PyObject_Type
_PyString_AsString
_PyString_ConcatAndDel
_Py_FindMethod
__PyObject_New
_MAIN_
error: Command "g95 -shared build/temp.macosx-10.3-i386-2.4/build/
src.macosx-10.3-i386-2.4/Lib/fftpack/_fftpackmodule.o build/
temp.macosx-10.3-i386-2.4/Lib/fftpack/src/zfft.o build/
temp.macosx-10.3-i386-2.4/Lib/fftpack/src/drfft.o build/
temp.macosx-10.3-i386-2.4/Lib/fftpack/src/zrfft.o build/
temp.macosx-10.3-i386-2.4/Lib/fftpack/src/zfftnd.o build/
temp.macosx-10.3-i386-2.4/build/src.macosx-10.3-i386-2.4/
fortranobject.o -L/opt/local/lib -Lbuild/temp.macosx-10.3-i386-2.4 -
ldfftpack -lfftw3 -o build/lib.macosx-10.3-i386-2.4/scipy/fftpack/
_fftpack.so" failed with exit status 1
Error: Status 1 encountered during processing.
As before, any help would be greatly appreciated. Thanks!
Best
- Chris
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