Segfaults when staging into destroot
Dave Murray-Rust
D.S.Murray-Rust at sms.ed.ac.uk
Thu Oct 4 02:29:17 PDT 2007
On 1 Oct 2007, at 11:41, Dave Murray-Rust wrote:
>
> On 1 Oct 2007, at 10:51, Ryan Schmidt wrote:
>
>>
>> On Oct 1, 2007, at 04:45, Dave Murray-Rust wrote:
>>
>>> On 1 Oct 2007, at 07:28, Ryan Schmidt wrote:
>>>
>>>> On Sep 22, 2007, at 13:59, Dave Murray-Rust wrote:
>>>>
>>>>> I'm having real hassles with port - most packages fail to
>>>>> install, with a segfault, e.g.:
>>>> Make sure you have the latest OS and all updates (10.4.10 or
>>>> 10.3.9). Make sure you have the latest Xcode (2.4.1 for 10.4.10;
>>>> 1.5 for 10.3.9). Make sure you have the latest MacPorts (1.5.2).
>>>> Make sure you do NOT have anything at all installed in /sw, /usr/
>>>> local or any other place referenced in your PATH. Just have
>>>> MacPorts, which is usually in /opt/local. It works great by
>>>> itself, but other software installed in other locations can
>>>> cause unpredictable problems.
>>>>
>>>
>>> OSX == 10.4.10, Xcode == 2.4.1
>>> OK, I've moved everything which was installed (temporarily):
>>
>> Don't know what's going on. I agree with Paul -- can we see some
>> debug output please?
>>
>> sudo port clean --work zlib
>> sudo port -dv install zlib
[output moved to the bottom for readability]
Just wondering if there's any more debug output which would be useful
to diagnose this?
cheers,
dave
>
> dhcp-2-178:513:dave>sudo port clean --work zlib
> Password:
> ---> Cleaning zlib
> dhcp-2-178:514:dave>sudo port -dv install zlib
> DEBUG: Found port in file:///opt/local/var/macports/sources/
> rsync.macports.org/release/ports/archivers/zlib
> DEBUG: Changing to port directory: /opt/local/var/macports/sources/
> rsync.macports.org/release/ports/archivers/zlib
> DEBUG: Requested variant powerpc is not provided by port zlib.
> DEBUG: Requested variant darwin is not provided by port zlib.
> DEBUG: Requested variant macosx is not provided by port zlib.
> DEBUG: Executing org.macports.main (zlib)
> ---> Fetching zlib
> DEBUG: Executing org.macports.fetch (zlib)
> ---> Verifying checksum(s) for zlib
> DEBUG: Executing org.macports.checksum (zlib)
> ---> Checksumming zlib-1.2.3.tar.bz2
> DEBUG: Correct (md5) checksum for zlib-1.2.3.tar.bz2
> DEBUG: Correct (sha1) checksum for zlib-1.2.3.tar.bz2
> DEBUG: Correct (rmd160) checksum for zlib-1.2.3.tar.bz2
> DEBUG: setting option extract.cmd to /usr/bin/bzip2
> ---> Extracting zlib
> DEBUG: Executing org.macports.extract (zlib)
> ---> Extracting zlib-1.2.3.tar.bz2
> DEBUG: setting option extract.args to /opt/local/var/macports/
> distfiles/zlib/zlib-1.2.3.tar.bz2
> DEBUG: Environment:
> DEBUG: Assembled command: 'cd "/opt/local/var/macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_archi
> vers_zlib/work" && /usr/bin/bzip2 -dc /opt/local/var/macports/
> distfiles/zlib/zlib-1.2.3.tar.bz2 | /usr/bin/gnutar --no-same-owner
> -xf -'
> DEBUG: Executing org.macports.patch (zlib)
> ---> Applying patches to zlib
> ---> Applying /opt/local/var/macports/sources/rsync.macports.org/
> release/ports/archivers/zlib/files/patch-Makefile-static
> DEBUG: Environment:
> DEBUG: Assembled command: 'cd "/opt/local/var/macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_archi
> vers_zlib/work/zlib-1.2.3" && patch -p0'
> patching file Makefile.in
> ---> Configuring zlib
> DEBUG: Executing org.macports.configure (zlib)
> DEBUG: No compiler collection selected explicitly
> DEBUG: Environment: CXXFLAGS='-O2' CPPFLAGS='-I/opt/local/include'
> CFLAGS='-O2' LDFLAGS='-L/opt/local/lib'
> DEBUG: Assembled command: 'cd "/opt/local/var/macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_archi
> vers_zlib/work/zlib-1.2.3" && ./configure --prefix=/opt/local --
> shared'
> Checking for gcc...
> Checking for shared library support...
> Building shared library libz.1.2.3.dylib with gcc.
> Checking for unistd.h... Yes.
> Checking whether to use vs[n]printf() or s[n]printf()... using vs[n]
> printf()
> Checking for vsnprintf() in stdio.h... Yes.
> Checking for return value of vsnprintf()... Yes.
> Checking for errno.h... Yes.
> Checking for mmap support... Yes.
> ---> Building zlib with target all
> DEBUG: Executing org.macports.build (zlib)
> DEBUG: Environment:
> DEBUG: Assembled command: 'cd "/opt/local/var/macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_archi
> vers_zlib/work/zlib-1.2.3" && make all'
> gcc -O2 -DUSE_MMAP -c -o example.o example.c
> gcc -O2 -DUSE_MMAP -c -o adler32.o adler32.c
> gcc -O2 -DUSE_MMAP -c -o compress.o compress.c
> gcc -O2 -DUSE_MMAP -c -o crc32.o crc32.c
> gcc -O2 -DUSE_MMAP -c -o gzio.o gzio.c
> gcc -O2 -DUSE_MMAP -c -o uncompr.o uncompr.c
> gcc -O2 -DUSE_MMAP -c -o deflate.o deflate.c
> gcc -O2 -DUSE_MMAP -c -o trees.o trees.c
> gcc -O2 -DUSE_MMAP -c -o zutil.o zutil.c
> gcc -O2 -DUSE_MMAP -c -o inflate.o inflate.c
> gcc -O2 -DUSE_MMAP -c -o infback.o infback.c
> gcc -O2 -DUSE_MMAP -c -o inftrees.o inftrees.c
> gcc -O2 -DUSE_MMAP -c -o inffast.o inffast.c
> ar rc libz.a adler32.o compress.o crc32.o gzio.o uncompr.o
> deflate.o trees.o zutil.o inflate.o infback.o inftrees.o inffast.o
> gcc -dynamiclib -install_name /opt/local/lib/libz.1.dylib -
> compatibility_version 1 -current_version 1.2.3 -o libz.1.2.3.dylib
> adler32.o compress.o crc32.o gzio.o uncompr.o deflate.o trees.o
> zutil.o inflate.o infback.o inftrees.o inffast.o
> rm -f libz.dylib libz.1.dylib
> ln -s libz.1.2.3.dylib libz.dylib
> ln -s libz.1.2.3.dylib libz.1.dylib
> gcc -O2 -DUSE_MMAP -o example example.o -L. libz.1.2.3.dylib
> gcc -O2 -DUSE_MMAP -c -o minigzip.o minigzip.c
> gcc -O2 -DUSE_MMAP -o minigzip minigzip.o -L. libz.1.2.3.dylib
> ---> Staging zlib into destroot
> . changed
> gid expected 0 found 80 modified
> permissions expected 0775 found 0755 modified
> ./usr missing (created)
> . missing (directory not created: File exists)
> ./Applications missing (created)
> ./Developer missing (created)
> ./Library missing (created)
> . changed
> gid expected 80 found 0 modified
> permissions expected 0775 found 0755 modified
> ./bin missing (created)
> ./etc missing (created)
> ./include missing (created)
> ./lib missing (created)
> ./libexec missing (created)
> ./sbin missing (created)
> ./share missing (created)
> ./share/info missing (created)
> ./share/man missing (created)
> ./share/man/cat1 missing (created)
> ./share/man/cat2 missing (created)
> ./share/man/cat3 missing (created)
> ./share/man/cat4 missing (created)
> ./share/man/cat5 missing (created)
> ./share/man/cat6 missing (created)
> ./share/man/cat7 missing (created)
> ./share/man/cat8 missing (created)
> ./share/man/cat9 missing (created)
> ./share/man/catl missing (created)
> ./share/man/catn missing (created)
> ./share/man/man1 missing (created)
> ./share/man/man2 missing (created)
> ./share/man/man3 missing (created)
> ./share/man/man4 missing (created)
> ./share/man/man5 missing (created)
> ./share/man/man6 missing (created)
> ./share/man/man7 missing (created)
> ./share/man/man8 missing (created)
> ./share/man/man9 missing (created)
> ./share/man/manl missing (created)
> ./share/man/mann missing (created)
> ./share/nls missing (created)
> ./share/nls/C missing (created)
> ./share/nls/af_ZA.ISO8859-1 missing (created)
> ./share/nls/af_ZA.ISO8859-15 missing (created)
> ./share/nls/bg_BG.CP1251 missing (created)
> ./share/nls/cs_CZ.ISO8859-2 missing (created)
> ./share/nls/da_DK.ISO8859-1 missing (created)
> ./share/nls/da_DK.ISO8859-15 missing (created)
> ./share/nls/de_AT.ISO8859-1 missing (created)
> ./share/nls/de_AT.ISO8859-15 missing (created)
> ./share/nls/de_CH.ISO8859-1 missing (created)
> ./share/nls/de_CH.ISO8859-15 missing (created)
> ./share/nls/de_DE.ISO8859-1 missing (created)
> ./share/nls/de_DE.ISO8859-15 missing (created)
> ./share/nls/el_GR.ISO8859-7 missing (created)
> ./share/nls/en_AU.ISO8859-1 missing (created)
> ./share/nls/en_AU.ISO8859-15 missing (created)
> ./share/nls/en_AU.US-ASCII missing (created)
> ./share/nls/en_CA.ISO8859-1 missing (created)
> ./share/nls/en_CA.ISO8859-15 missing (created)
> ./share/nls/en_CA.US-ASCII missing (created)
> ./share/nls/en_GB.ISO8859-1 missing (created)
> ./share/nls/en_GB.ISO8859-15 missing (created)
> ./share/nls/en_GB.US-ASCII missing (created)
> ./share/nls/en_NZ.ISO8859-1 missing (created)
> ./share/nls/en_NZ.ISO8859-15 missing (created)
> ./share/nls/en_NZ.US-ASCII missing (created)
> ./share/nls/en_US.ISO8859-1 missing (created)
> ./share/nls/en_US.ISO8859-15 missing (created)
> ./share/nls/es_ES.ISO8859-1 missing (created)
> ./share/nls/es_ES.ISO8859-15 missing (created)
> ./share/nls/et_EE.ISO8859-15 missing (created)
> ./share/nls/fi_FI.ISO8859-1 missing (created)
> ./share/nls/fi_FI.ISO8859-15 missing (created)
> ./share/nls/fr_BE.ISO8859-1 missing (created)
> ./share/nls/fr_BE.ISO8859-15 missing (created)
> ./share/nls/fr_CA.ISO8859-1 missing (created)
> ./share/nls/fr_CA.ISO8859-15 missing (created)
> ./share/nls/fr_CH.ISO8859-1 missing (created)
> ./share/nls/fr_CH.ISO8859-15 missing (created)
> ./share/nls/fr_FR.ISO8859-1 missing (created)
> ./share/nls/fr_FR.ISO8859-15 missing (created)
> ./share/nls/hi_IN.ISCII-DEV missing (created)
> ./share/nls/hr_HR.ISO8859-2 missing (created)
> ./share/nls/hu_HU.ISO8859-2 missing (created)
> ./share/nls/is_IS.ISO8859-1 missing (created)
> ./share/nls/is_IS.ISO8859-15 missing (created)
> ./share/nls/it_CH.ISO8859-1 missing (created)
> ./share/nls/it_CH.ISO8859-15 missing (created)
> ./share/nls/it_IT.ISO8859-1 missing (created)
> ./share/nls/it_IT.ISO8859-15 missing (created)
> ./share/nls/ja_JP.SJIS missing (created)
> ./share/nls/ja_JP.eucJP missing (created)
> ./share/nls/ko_KR.eucKR missing (created)
> ./share/nls/la_LN.ISO8859-1 missing (created)
> ./share/nls/la_LN.ISO8859-15 missing (created)
> ./share/nls/la_LN.ISO8859-2 missing (created)
> ./share/nls/la_LN.ISO8859-4 missing (created)
> ./share/nls/la_LN.US-ASCII missing (created)
> ./share/nls/lt_LT.ISO8859-4 missing (created)
> ./share/nls/nl_BE.ISO8859-1 missing (created)
> ./share/nls/nl_BE.ISO8859-15 missing (created)
> ./share/nls/nl_NL.ISO8859-1 missing (created)
> ./share/nls/nl_NL.ISO8859-15 missing (created)
> ./share/nls/no_NO.ISO8859-1 missing (created)
> ./share/nls/no_NO.ISO8859-15 missing (created)
> ./share/nls/pl_PL.ISO8859-2 missing (created)
> ./share/nls/pt_BR.ISO8859-1 missing (created)
> ./share/nls/pt_PT.ISO8859-1 missing (created)
> ./share/nls/pt_PT.ISO8859-15 missing (created)
> ./share/nls/ro_RO.ISO8859-2 missing (created)
> ./share/nls/ru_RU.CP866 missing (created)
> ./share/nls/ru_RU.ISO8859-5 missing (created)
> ./share/nls/ru_RU.KOI8-R missing (created)
> ./share/nls/sk_SK.ISO8859-2 missing (created)
> ./share/nls/sl_SI.ISO8859-2 missing (created)
> ./share/nls/sv_SE.ISO8859-1 missing (created)
> ./share/nls/sv_SE.ISO8859-15 missing (created)
> ./share/nls/tr_TR.ISO8859-9 missing (created)
> ./share/nls/uk_UA.ISO8859-5 missing (created)
> ./share/nls/uk_UA.KOI8-U missing (created)
> ./share/nls/zh_CN.eucCN missing (created)
> ./share/nls/zh_TW.Big5 missing (created)
> ./share/skel missing (created)
> ./src missing (created)
> ./var missing (created)
> ./var/macports missing (created)
> ./var/macports/distfiles missing (created)
> ./var/macports/receipts missing (created)
> ./www missing (created)
> DEBUG: Executing org.macports.destroot (zlib)
> DEBUG: Environment:
> DEBUG: Assembled command: 'cd "/opt/local/var/macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_archi
> vers_zlib/work/zlib-1.2.3" && make install prefix=/opt/local/var/
> macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_archi
> vers_zlib/work/destroot/opt/local'
> cp zlib.h zconf.h /opt/local/var/macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_archi
> vers_zlib/work/destroot/opt/local/include
> chmod 644 /opt/local/var/macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_archi
> vers_zlib/work/destroot/opt/local/include/zlib.h /opt/local/var/
> macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_archi
> vers_zlib/work/destroot/opt/local/include/zconf.h
> cp libz.1.2.3.dylib /opt/local/var/macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_archi
> vers_zlib/work/destroot/opt/local/lib
> cp libz.a /opt/local/var/macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_archi
> vers_zlib/work/destroot/opt/local/lib
> cd /opt/local/var/macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_archi
> vers_zlib/work/destroot/opt/local/lib; chmod 755 libz.1.2.3.dylib
> cd /opt/local/var/macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_archi
> vers_zlib/work/destroot/opt/local/lib; if test -f libz.1.2.3.dylib;
> then \
> rm -f libz.dylib libz.1.dylib; \
> ln -s libz.1.2.3.dylib libz.dylib; \
> ln -s libz.1.2.3.dylib libz.1.dylib; \
> (ldconfig || true) >/dev/null 2>&1; \
> fi
> cp zlib.3 /opt/local/var/macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_archi
> vers_zlib/work/destroot/opt/local/share/man/man3
> chmod 644 /opt/local/var/macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_archi
> vers_zlib/work/destroot/opt/local/share/man/man3/zlib.3
> DEBUG: Executing proc-post-org.macports.destroot-destroot-0
> xinstall: mkdir /opt/local/var/macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_archi
> vers_zlib/work/destroot/opt/local/share/doc
> xinstall: mkdir /opt/local/var/macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_archi
> vers_zlib/work/destroot/opt/local/share/doc/zlib-1.2.3
> xinstall: chdir(/opt/local/var/macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_archi
> vers_zlib/work/zlib-1.2.3)
> xinstall: ChangeLog -> /opt/local/var/macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_archi
> vers_zlib/work/destroot/opt/local/share/doc/zlib-1.2.3/ChangeLog
> tclsh(8352) malloc: *** error for object 0x313390: double free
> tclsh(8352) malloc: *** set a breakpoint in szone_error to debug
> xinstall: FAQ -> /opt/local/var/macports/build/
> _opt_local_var_macports_sources_rsync.macports.org_release_ports_archi
> vers_zlib/work/destroot/opt/local/share/doc/zlib-1.2.3/FAQ
> Segmentation fault
>
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