help - macports modules not found?

Johnson, Matthew Matthew.Johnson at childrens.harvard.edu
Fri Jun 11 11:12:52 PDT 2010


Ah, thank you so much Josh!  I was not understanding the distinction between things like cairo, gtk, et al and the bindings/whatever that allow perl to use those.

Now that I understand that, I've managed to install all the modules that I need.  So now I get the much shorter error: segmentation fault.  i think i'll give up now.  bleh.  (if anyone's looking for a project, i'm just trying to get this program to run on mac: http://sourceforge.net/projects/haplopainter/)

On Jun 11, 2010, at 12:11 PM, Joshua Root wrote:

> On 2010-6-12 01:53 , Johnson, Matthew wrote:
>> Hi all-
>> I have searched everywhere, but I am new to perl and can't seem to find the answer. I installed macports 1.8.2 on 10.6.3 (xcode 3.2.2 installed), installed some modules using "sudo port install ..." but when I run a perl program I get, e.g.,
>> 
>> Can't locate Cairo.pm in @INC (@INC contains: /opt/local/lib/perl5/site_perl/5.8.9/darwin-2level /opt/local/lib/perl5/site_perl/5.8.9 /opt/local/lib/perl5/site_perl /opt/local/lib/perl5/vendor_perl/5.8.9/darwin-2level /opt/local/lib/perl5/vendor_perl/5.8.9 /opt/local/lib/perl5/vendor_perl /opt/local/lib/perl5/5.8.9/darwin-2level /opt/local/lib/perl5/5.8.9 .) at ./HaploPainter1.043.pl line 21.
>> BEGIN failed--compilation aborted at ./HaploPainter1.043.pl line 21.
>> 
>> The module is installed:
>> $ port installed
>> The following ports are currently installed:
>> atk @1.30.0_0 (active)
>> autoconf @2.65_1 (active)
>> automake @1.11.1_0 (active)
>> bzip2 @1.0.5_3+darwin (active)
>> cairo @1.8.10_0+macosx (active)
>> ...
>> 
>> $ port dir cairo
>> /opt/local/var/macports/sources/rsync.macports.org/release/ports/graphics/cairo
>> 
>> But the actual file Cairo.pm is nowhere to be found. (locate Cairo.pm gives nothing. Also, this command I found to list installed perl mods doesn't list it:http://www.linuxquestions.org/questions/linux-general-1/how-to-list-all-installed-perl-modules-216603/ )
>> 
>> Also, I've made sure I'm using the macports perl by changing the first line of the script to #!/opt/local/bin/perl and tried running it specifically from the command line as "/opt/local/bin/perl <script>"
>> 
>> I feel like I'm missing a major step somewhere, and would really appreciate some guidance.
> 
> Cairo is not a perl module. You probably want p5-cairo.
> 
> - Josh



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