sudo port install tk -quartz problem (related with pymol)

[Peng Yu]

Hi,

I get the following error when I try to run 'sudo port install tk
-quartz' (suggested at the end of this page
http://trac.macports.org/ticket/37062 for installing pymol). Does
anybody how to fix the problem with tk and get pymol installed?
Thanks!

~$ sudo port install tk -quartz
Password:
--->  Computing dependencies for tk
--->  Fetching archive for tk
--->  Attempting to fetch tk-8.6.0_0.darwin_12.x86_64.tbz2 from
http://packages.macports.org/tk
--->  Attempting to fetch tk-8.6.0_0.darwin_12.x86_64.tbz2 from
http://mse.uk.packages.macports.org/sites/packages.macports.org/tk
--->  Attempting to fetch tk-8.6.0_0.darwin_12.x86_64.tbz2 from
http://lil.fr.packages.macports.org/tk
--->  Fetching distfiles for tk
--->  Attempting to fetch tk8.6.0-src.tar.gz from
http://superb-dca2.dl.sourceforge.net/tcl
--->  Verifying checksum(s) for tk
--->  Extracting tk
--->  Configuring tk
--->  Building tk
--->  Staging tk into destroot
--->  Installing tk @8.6.0_0
--->  Deactivating tk @8.6.0_0+quartz
--->  Cleaning tk
--->  Activating tk @8.6.0_0
--->  Cleaning tk
--->  Updating database of binaries: 100.0%
--->  Scanning binaries for linking errors: 100.0%
--->  Found 1 broken file(s), matching files to ports
--->  Found 1 broken port(s), determining rebuild order
--->  Rebuilding in order
     tk @8.6.0 -quartz
--->  Computing dependencies for tk
--->  Cleaning tk
--->  Scanning binaries for linking errors: 100.0%
--->  Found 1 broken file(s), matching files to ports
--->  Found 1 broken port(s), determining rebuild order
--->  Rebuilding in order
     tk @8.6.0 -quartz
--->  Computing dependencies for tk
--->  Cleaning tk
--->  Unable to uninstall tk @8.6.0_0, the following ports depend on it:
--->  	py27-tkinter @2.7.3_0
--->  	py27-tkinter @2.7.3_2
--->  	py26-tkinter @2.6.8_2
Warning: Uninstall forced.  Proceeding despite dependencies.
--->  Deactivating tk @8.6.0_0
--->  Unable to deactivate tk @8.6.0_0, the following ports depend on it:
--->  	py27-tkinter @2.7.3_2
--->  	py26-tkinter @2.6.8_2
Warning: Deactivate forced.  Proceeding despite dependencies.
--->  Cleaning tk
--->  Uninstalling tk @8.6.0_0
--->  Cleaning tk
--->  Computing dependencies for tk
--->  Fetching distfiles for tk
--->  Verifying checksum(s) for tk
--->  Extracting tk
--->  Configuring tk
--->  Building tk
--->  Staging tk into destroot
--->  Installing tk @8.6.0_0
--->  Activating tk @8.6.0_0
--->  Cleaning tk
--->  Updating database of binaries: 100.0%
--->  Scanning binaries for linking errors: 100.0%
--->  Found 1 broken file(s), matching files to ports
--->  Found 1 broken port(s), determining rebuild order
--->  Rebuilding in order
     tk @8.6.0 -quartz
--->  Computing dependencies for tk
--->  Cleaning tk
--->  Unable to uninstall tk @8.6.0_0, the following ports depend on it:
--->  	py27-tkinter @2.7.3_0
--->  	py27-tkinter @2.7.3_2
--->  	py26-tkinter @2.6.8_2
Warning: Uninstall forced.  Proceeding despite dependencies.
--->  Deactivating tk @8.6.0_0
--->  Unable to deactivate tk @8.6.0_0, the following ports depend on it:
--->  	py27-tkinter @2.7.3_2
--->  	py26-tkinter @2.6.8_2
Warning: Deactivate forced.  Proceeding despite dependencies.
--->  Cleaning tk
--->  Uninstalling tk @8.6.0_0
--->  Cleaning tk
--->  Computing dependencies for tk
--->  Fetching distfiles for tk
--->  Verifying checksum(s) for tk
--->  Extracting tk
--->  Configuring tk
--->  Building tk
--->  Staging tk into destroot
--->  Installing tk @8.6.0_0
--->  Activating tk @8.6.0_0
--->  Cleaning tk
--->  Updating database of binaries: 100.0%
--->  Scanning binaries for linking errors: 100.0%
--->  Found 1 broken file(s), matching files to ports
Error: Port tk is still broken after rebuiling it more than 3 times.
Error: Please run port -d -y rev-upgrade and use the output to report a bug.
Port tk still broken after rebuilding 3 time(s)
    while executing
"error "Port $portname still broken after rebuilding [expr
$broken_port_counts($portname) - 1] time(s)""
    (procedure "revupgrade_scanandrebuild" line 256)
    invoked from within
"revupgrade_scanandrebuild broken_port_counts $opts"
    (procedure "macports::revupgrade" line 5)
    invoked from within
"macports::revupgrade $opts"
    (procedure "action_revupgrade" line 2)
    invoked from within
"action_revupgrade $action $portlist $opts"
    (procedure "action_target" line 94)
    invoked from within
"$action_proc $action $portlist [array get global_options]"
    (procedure "process_cmd" line 95)
    invoked from within
"process_cmd $remaining_args"
    invoked from within
"if { [llength $remaining_args] > 0 } {

    # If there are remaining arguments, process those as a command
    set exit_status [process_cmd $remaining..."
    (file "/opt/local/bin/port" line 4784)


-- 
Regards,
Peng