Undefined symbols for architecture x86_64 error on fortran compiling

zhifeng yang yangzf01 at gmail.com
Wed Dec 11 08:13:20 PST 2013


Here is the whole command to compile this fortran code with error

ifort -o wrf.exe -openmp -fpp -auto -O3 -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian   -ip -Wl,-stack_addr,0xF10000000 -Wl,-stack_size,0x64000000 -m64   wrf.o ../main/module_wrf_top.o libwrflib.a /Users/bruce/Documents/A/model/WRFChem/WRFChem3_5_1/WRFV3/external/fftpack/fftpack5/libfftpack.a /Users/bruce/Documents/A/model/WRFChem/WRFChem3_5_1/WRFV3/external/io_grib1/libio_grib1.a /Users/bruce/Documents/A/model/WRFChem/WRFChem3_5_1/WRFV3/external/io_grib_share/libio_grib_share.a /Users/bruce/Documents/A/model/WRFChem/WRFChem3_5_1/WRFV3/external/io_int/libwrfio_int.a -L/Users/bruce/Documents/A/model/WRFChem/WRFChem3_5_1/WRFV3/external/esmf_time_f90 -lesmf_time /Users/bruce/Documents/A/model/WRFChem/WRFChem3_5_1/WRFV3/external/RSL_LITE/librsl_lite.a /Users/bruce/Documents/A/model/WRFChem/WRFChem3_5_1/WRFV3/frame/module_internal_header_util.o /Users/bruce/Documents/A/model/WRFChem/WRFChem3_5_1/WRFV3/frame/pack_utils.o  -L/Users/bruce/Documents/A/model/WRFChem/WRFChem3_5_1/WRFV3/external/io_netcdf -lwrfio_nf -L/opt/local/lib -lnetcdff -lnetcdf
Undefined symbols for architecture x86_64:
  "_module_data_soa_vbs_mp_ccofm_", referenced from:
      _module_aerosols_soa_vbs_mp_nuclcond_ in libwrflib.a(module_aerosols_soa_vbs.o)
      _module_aerosols_soa_vbs_mp_aerosols_soa_vbs_init_ in libwrflib.a(module_aerosols_soa_vbs.o)
  "_module_data_soa_vbs_mp_ccofm_org_", referenced from:
      _module_aerosols_soa_vbs_mp_nuclcond_ in libwrflib.a(module_aerosols_soa_vbs.o)
      _module_aerosols_soa_vbs_mp_aerosols_soa_vbs_init_ in libwrflib.a(module_aerosols_soa_vbs.o)
  "_module_data_soa_vbs_mp_cw_phase_", referenced from:
      _module_aerosols_soa_vbs_mp_modpar_ in libwrflib.a(module_aerosols_soa_vbs.o)
      _module_aerosols_soa_vbs_mp_modpar_..0 in libwrflib.a(module_aerosols_soa_vbs.o)

Thank you
Bruce

On Dec 11, 2013, at 10:09 AM, zhifeng yang <yangzf01 at gmail.com> wrote:

> Here is the whole error
> 
> Undefined symbols for architecture x86_64:
>   "___kmpc_end_master", referenced from:
>       _wrf_message_ in module_wrf_error.o
>       _wrf_message2_ in module_wrf_error.o      _wrf_check_error_ in module_wrf_error.o      _wrf_error_fatal_ in module_wrf_error.o      _wrf_error_fatal3_ in module_wrf_error.o
>   "___kmpc_global_thread_num", referenced from:
>       _wrf_message_ in module_wrf_error.o
>       _wrf_message2_ in module_wrf_error.o
>       _wrf_check_error_ in module_wrf_error.o
>       _wrf_error_fatal_ in module_wrf_error.o
>       _wrf_error_fatal3_ in module_wrf_error.o
>       _module_wrf_error._ in module_wrf_error.o
>   "___kmpc_master", referenced from:
>       _wrf_message_ in module_wrf_error.o
>       _wrf_message2_ in module_wrf_error.o
>       _wrf_check_error_ in module_wrf_error.o
>       _wrf_error_fatal_ in module_wrf_error.o
>       _wrf_error_fatal3_ in module_wrf_error.o
> ld: symbol(s) not found for architecture x86_64
> make[2]: [diffwrf] Error 1 (ignored)
> 
> Actually the code is fine, no error in the code. Because it’s from WRF committee. I guess the reason that I get the error is from compiler or its flags. But I am not sure currently.
> 
> Thank you
> Bruce
> 
> On Dec 11, 2013, at 10:06 AM, Ryan Schmidt <ryandesign at macports.org> wrote:
> 
>> 
>> On Dec 11, 2013, at 01:40, Gmail wrote:
>> 
>>> When I compile a fortran code, I got the error 
>>> Undefined symbols for architecture x86_64
>>> 
>>> My mac is 64bits. The fortran compiler used here is ifort.
>> 
>> The relevant information would be *what* symbols were undefined, what your code looks like, and where those symbols are actually defined.
>> 
>> 
> 

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