port upgrade failed after mac upgrade

[Shiyuan]

Hi,
   Macports used to work well on Mac 10.8. After a upgrade to mac 10.9,
`sudo port upgrade -u outdated` gives errors complaining privilege (but I
do have the `sudo` privilege and it worked well before the mac upgrade) .
The port sync is done via svn.  The screenshot and main.log are attached
below.   Any help/suggestions are appreciated. Thank.

-----------Screen shot ------------------------------------

685b35881646:~ shiyuang$ sudo port upgrade -u outdated

Password:

--->  Fetching archive for aquaterm

--->  Attempting to fetch aquaterm-1.1.1_0.darwin_13.x86_64.tbz2 from
http://mse.uk.packages.macports.org/sites/packages.macports.org/aquaterm

--->  Attempting to fetch aquaterm-1.1.1_0.darwin_13.x86_64.tbz2.rmd160
from
http://mse.uk.packages.macports.org/sites/packages.macports.org/aquaterm

--->  Unable to uninstall aquaterm @1.1.1_0, the following ports depend on
it:

--->  gnuplot @4.6.5_0+aquaterm+luaterm+pangocairo+wxwidgets+x11

Warning: Uninstall forced.  Proceeding despite dependencies.

--->  Deactivating aquaterm @1.1.1_0

--->  Unable to deactivate aquaterm @1.1.1_0, the following ports depend on
it:

--->  gnuplot @4.6.5_0+aquaterm+luaterm+pangocairo+wxwidgets+x11

Warning: Deactivate forced.  Proceeding despite dependencies.

--->  Cleaning aquaterm

--->  Uninstalling aquaterm @1.1.1_0

--->  Cleaning aquaterm

--->  Installing aquaterm @1.1.1_0

--->  Activating aquaterm @1.1.1_0

--->  Cleaning aquaterm

--->  Fetching distfiles for gmp

--->  Attempting to fetch gmp-6.0.0a.tar.bz2 from
http://sea.us.distfiles.macports.org/macports/distfiles/gmp

--->  Verifying checksums for gmp

--->  Extracting gmp

Error: org.macports.extract for port gmp returned: command execution failed

Please see the log file for port gmp for details:


/opt/local/var/macports/logs/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_devel_gmp/gmp/main.log

Error: Unable to upgrade port: 1

To report a bug, follow the instructions in the guide:

    http://guide.macports.org/#project.tickets

685b35881646:~ shiyuang$ Emacs
/opt/local/var/macports/logs/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_devel_gmp/gmp/main.log

685b35881646:~ shiyuang$ Emacs
/opt/local/var/macports/logs/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_devel_gmp/gmp/main.log
---------------- Below: main.log-------------------------------
version:1
:debug:clean gmp has no conflicts
:debug:main Executing org.macports.main (gmp)
:debug:main changing euid/egid - current euid: 0 - current egid: 0
:debug:main egid changed to: 501
:debug:main euid changed to: 502
:debug:archivefetch archivefetch phase started at Mon May 12 11:40:59 PDT
2014
:debug:archivefetch Executing org.macports.archivefetch (gmp)
:debug:archivefetch Privilege de-escalation not attempted as not running as
root.
:debug:fetch fetch phase started at Mon May 12 11:40:59 PDT 2014
:notice:fetch --->  Fetching distfiles for gmp
:debug:fetch Can't run fetch on this port without elevated privileges.
Escalating privileges back to root.
:debug:fetch euid changed to: 0. egid changed to: 0.
:debug:fetch changing euid/egid - current euid: 0 - current egid: 0
:debug:fetch egid changed to: 501
:debug:fetch euid changed to: 502
:debug:fetch Executing org.macports.fetch (gmp)
:info:fetch --->  gmp-6.0.0a.tar.bz2 doesn't seem to exist in
/opt/local/var/macports/distfiles/gmp
:notice:fetch --->  Attempting to fetch gmp-6.0.0a.tar.bz2 from
http://sea.us.distfiles.macports.org/macports/distfiles/gmp
:debug:fetch Privilege de-escalation not attempted as not running as root.
:debug:checksum checksum phase started at Mon May 12 11:41:08 PDT 2014
:notice:checksum --->  Verifying checksums for gmp
:debug:checksum Executing org.macports.checksum (gmp)
:info:checksum --->  Checksumming gmp-6.0.0a.tar.bz2
:debug:checksum Correct (rmd160) checksum for gmp-6.0.0a.tar.bz2
:debug:checksum Correct (sha256) checksum for gmp-6.0.0a.tar.bz2
:debug:checksum Privilege de-escalation not attempted as not running as
root.
:debug:extract extract phase started at Mon May 12 11:41:08 PDT 2014
:notice:extract --->  Extracting gmp
:debug:extract setting option extract.cmd to /usr/bin/bzip2
:debug:extract Executing org.macports.extract (gmp)
:info:extract --->  Extracting gmp-6.0.0a.tar.bz2
:debug:extract setting option extract.args to
'/opt/local/var/macports/distfiles/gmp/gmp-6.0.0a.tar.bz2'
:debug:extract Environment: CPATH='/opt/local/include'
CC_PRINT_OPTIONS_FILE='/opt/local/var/macports/build/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_devel_gmp/gmp/work/.CC_PRINT_OPTIONS'
LIBRARY_PATH='/opt/local/lib' CC_PRINT_OPTIONS='YES'
MACOSX_DEPLOYMENT_TARGET='10.9'
:debug:extract Assembled command: 'cd
"/opt/local/var/macports/build/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_devel_gmp/gmp/work"
&& /usr/bin/bzip2 -dc
'/opt/local/var/macports/distfiles/gmp/gmp-6.0.0a.tar.bz2' |
/usr/bin/gnutar --no-same-owner -xf -'
:debug:extract Executing command line:  cd
"/opt/local/var/macports/build/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_devel_gmp/gmp/work"
&& /usr/bin/bzip2 -dc
'/opt/local/var/macports/distfiles/gmp/gmp-6.0.0a.tar.bz2' |
/usr/bin/gnutar --no-same-owner -xf -
:info:extract sh: /usr/bin/gnutar: No such file or directory
:info:extract
:info:extract bzip2: I/O or other error, bailing out.  Possible reason
follows.
:info:extract bzip2: Broken pipe
:info:extract Input file =
/opt/local/var/macports/distfiles/gmp/gmp-6.0.0a.tar.bz2, output file =
(stdout)
:info:extract Command failed:  cd
"/opt/local/var/macports/build/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_devel_gmp/gmp/work"
&& /usr/bin/bzip2 -dc
'/opt/local/var/macports/distfiles/gmp/gmp-6.0.0a.tar.bz2' |
/usr/bin/gnutar --no-same-owner -xf -
:info:extract Exit code: 127
:error:extract org.macports.extract for port gmp returned: command
execution failed
:debug:extract Error code: NONE
:debug:extract Backtrace: command execution failed
    while executing
"$procedure $targetname"
:info:extract Warning: targets not executed for gmp: org.macports.install
org.macports.extract org.macports.patch org.macports.configure
org.macports.build org.macports.destroot
:notice:extract Please see the log file for port gmp for details:

/opt/local/var/macports/logs/_opt_local_var_macports_sources_svn.macports.org_trunk_dports_devel_gmp/gmp/main.log
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