Fail to install git from macports ("can't find file to patch" error)

[Joshua Kordani]

Not the OP, but regarding DYLD_LIBRARY_PATH, I don't understand how to 
make use of dylib's provided by macports in my own programs without 
setting this flag.  I've read in several places that, esp with macports, 
this should not be necessary, but I don't know what the *right way* is.


On 2/19/18 5:18 PM, Ryan Schmidt wrote:
> On Feb 19, 2018, at 13:37, Qianqian Fang wrote:
>
>> I don't know what was changed recently, the built-in git command from Xcode stopped working with the following error
>>
>> fangq at jinwy:~/space/git/Project/autobuild/mcx$ git pull
>> dyld: lazy symbol binding failed: Symbol not found: _iconv_open
>>    Referenced from: /Library/Developer/CommandLineTools/usr/libexec/git-core/git
>>    Expected in: /opt/local/lib/libiconv.2.dylib
>>
>> dyld: Symbol not found: _iconv_open
>>    Referenced from: /Library/Developer/CommandLineTools/usr/libexec/git-core/git
>>    Expected in: /opt/local/lib/libiconv.2.dylib
>>
>> error: fetch died of signal 6
> Nothing of Apple's (such as /Library/Developer/CommandLineTools/usr/libexec/git-core/git) should be referencing anything of MacPorts's (such as /opt/local/lib/libiconv.2.dylib). The only reason that might happen is if you set DYLD_LIBRARY_PATH. So don't set that.
>
>> I can only fix this if I put /usr/lib in the front of DYLD_LIBRARY_PATH, but this breaks tons of other command.
> You should not need to set DYLD_LIBRARY_PATH at all. Why do you think you need to?
>
>
>> So, I decided to install a git from macports, however, this attempt failed with the following error:
>>
>> fangq at jinwy:~/space/git/Project/autobuild/mcx$ sudo port install git
>> Warning: xcodebuild exists but failed to execute
>> Warning: Xcode does not appear to be installed; most ports will likely fail to build.
>> --->  Computing dependencies for git
>> --->  Applying patches to git
>> Error: Failed to patch git: command execution failed
>> Error: See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_devel_git/git/main.log for details.
>> Error: Follow https://guide.macports.org/#project.tickets to report a bug.
>> Error: Processing of port git failed
>> look at the main.log file, I found the error message attached at the end.
>>
>> My macport version is 2.4.2, OS is Sierra, already ran port selfupdate.
>> I have an old version of xcode (7.3) in order to compile cuda code, but I don't think it was the issue.
> I agree that an old Xcode would not cause a patch failure, but note that macOS Sierra requires Xcode 8 or 9.
>
>
>> can someone let me know how to fix this? alternative approaches, such as portable git binaries are also welcome, thanks a lot!
>> Qianqian
>>
>>
>> :debug:main Executing org.macports.main (git)
>> :debug:main dropping privileges: euid changed to 502, egid changed to 505.
>> :debug:main Skipping completed org.macports.archivefetch (git)
>> :debug:main Privilege de-escalation not attempted as not running as root.
>> :debug:main Skipping completed org.macports.fetch (git)
>> :debug:main Privilege de-escalation not attempted as not running as root.
>> :debug:main Skipping completed org.macports.checksum (git)
>> :debug:main Privilege de-escalation not attempted as not running as root.
>> :debug:main Skipping completed org.macports.extract (git)
>> :debug:main Privilege de-escalation not attempted as not running as root.
> The "Skipping" lines show us that this was not a clean attempt so no conclusions can be reached from it. "sudo port clean git" and try again.
>
>