[MacPorts] #40317: stimfit @0.12.4_2: update 0.12.8

MacPorts noreply at macports.org
Sun Sep 1 08:09:54 PDT 2013


#40317: stimfit @0.12.4_2: update 0.12.8
-------------------------+---------------------------------
  Reporter:  christsc@…  |      Owner:  macports-tickets@…
      Type:  update      |     Status:  new
  Priority:  Normal      |  Milestone:
 Component:  ports       |    Version:
Resolution:              |   Keywords:  haspatch maintainer
      Port:  stimfit     |
-------------------------+---------------------------------

Comment (by mojca@…):

 To be more precise:
 {{{
 checking for kernel... checking for fftw_malloc in -lfftw3... yes
 checking for dgemm_ in -latlas... no
 checking for dgemm_ in -llapack... no
 configure: error: Couldn't find lapack.
 }}}
 I do have a symlink
 {{{
 /usr/lib/liblapack.dylib ->
 ../../System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib
 }}}
 but for some reason it wasn't found and the general policy of MacPorts is
 to try to be as independent of the system-provided libraries as possible.

 I thought that some port was supposed to provide the required libraries.
 My installation of atlas contains
 {{{
 /opt/local/lib/libatlas.a
 /opt/local/lib/liblapack.a
 }}}
 (I don't know why the libraries are static), but the port doesn't seem to
 be satisfied with those either.

 Unrelated: did you even try to play with `PortGroup python 1.0` (or
 `python27`)?

 I have no problem committing the port as-is - it was probably "equally
 broken" earlier than it is now, but it would be nice to inspect why this
 happens.

 I'm on 10.7. Maybe different OS provides different functions and `dgemm_`
 happens to be absent on mine?

-- 
Ticket URL: <https://trac.macports.org/ticket/40317#comment:7>
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