[MacPorts] #40317: stimfit @0.12.4_2: update 0.12.8

[MacPorts]

#40317: stimfit @0.12.4_2: update 0.12.8
-------------------------+---------------------------------
  Reporter:  christsc@…  |      Owner:  macports-tickets@…
      Type:  update      |     Status:  new
  Priority:  Normal      |  Milestone:
 Component:  ports       |    Version:
Resolution:              |   Keywords:  haspatch maintainer
      Port:  stimfit     |
-------------------------+---------------------------------

Comment (by mojca@…):

 The installation went fine after that. So I can apply the patch and commit
 and then you can take some time figuring out how exactly the different Mac
 OS X versions bundle lapack.

 The weird thing is also that `configure.ac` seems to test `-lblas` later
 on, but the program never reaches that point and configure throws an error
 earlier, not giving `-lblas` a chance.

 In the long term I would suggest creating a package for `lapack`/`blas`
 for MacPorts.

 In case it's relevant, here are a few warnings:
 {{{
 ./abf/axon/AxAbfFio32/abfheadr.cpp:796:24: warning: explicitly assigning a
 variable of type 'int' to itself [-Wself-assign]
       int pFH = 0; pFH = pFH;
                    ~~~ ^ ~~~
 1 warning generated.

 In file included from ./gui/doc.cpp:59:
 ./gui/./doc.h:94:67: warning: private field 'APPeak' is not used
 [-Wunused-private-field]
         base, APBase, baseSD, threshold, slopeForThreshold, peak, APPeak,
 tLoReal, tHiReal, t50LeftReal, t50RightReal,
                                                                   ^
 ./gui/./doc.h:96:23: warning: private field 'APMaxRise' is not used
 [-Wunused-private-field]
         t50Y, APMaxT, APMaxRise, APMaxRiseT, APt50LeftReal,
                       ^
 2 warnings generated.

 In file included from ./gui/childframe.cpp:64:
 ./gui/./childframe.h:214:17: warning: private field 'pTracesBoxSizer' is
 not used [-Wunused-private-field]
     wxBoxSizer *pTracesBoxSizer, *pChannelsBoxSizer;
                 ^
 ./gui/./childframe.h:214:35: warning: private field 'pChannelsBoxSizer' is
 not used [-Wunused-private-field]
     wxBoxSizer *pTracesBoxSizer, *pChannelsBoxSizer;
                                   ^
 ./gui/./childframe.h:217:10: warning: private field 'firstResize' is not
 used [-Wunused-private-field]
     bool firstResize;
          ^
 3 warnings generated.

 In file included from ./gui/dlgs/smalldlgs.cpp:16:
 ./gui/dlgs/./smalldlgs.h:666:22: warning: private field 'm_srcDirPicker'
 is not used [-Wunused-private-field]
     wxDirPickerCtrl *m_srcDirPicker,*m_destDirPicker;
                      ^
 ./gui/dlgs/./smalldlgs.h:666:38: warning: private field 'm_destDirPicker'
 is not used [-Wunused-private-field]
     wxDirPickerCtrl *m_srcDirPicker,*m_destDirPicker;
                                      ^
 ./gui/dlgs/./smalldlgs.h:667:17: warning: private field
 'm_textCtrlSrcFilter' is not used [-Wunused-private-field]
     wxTextCtrl *m_textCtrlSrcFilter;
                 ^
 3 warnings generated.

 In file included from ./pystf.cxx:66:
 In file included from
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/core/include/numpy/arrayobject.h:15:
 In file included from
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/core/include/numpy/ndarrayobject.h:17:
 In file included from
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/core/include/numpy/ndarraytypes.h:1728:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/core/include/numpy/npy_deprecated_api.h:11:2:
 warning: "Using deprecated NumPy API, disable it by #defining
 NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings]
 #warning "Using deprecated NumPy API, disable it by #defining
 NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION"
  ^
 In file included from ./pystf_wrap.cxx:3077:
 In file included from
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/core/include/numpy/arrayobject.h:15:
 In file included from
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/core/include/numpy/ndarrayobject.h:17:
 In file included from
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/core/include/numpy/ndarraytypes.h:1728:
 /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7
 /site-packages/numpy/core/include/numpy/npy_deprecated_api.h:11:2:
 warning: "Using deprecated NumPy API, disable it by #defining
 NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings]
 #warning "Using deprecated NumPy API, disable it by #defining
 NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION"
  ^
 1 warning generated.
 }}}

-- 
Ticket URL: <https://trac.macports.org/ticket/40317#comment:15>
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