Macports, mri ports problem with AFNI...

David Perlman dperlman at
Mon Sep 8 11:10:04 PDT 2008

Hello all, I'm new to this list but I've been successfully using afni  
installed and updated with macports for a couple of years now.   
However, earlier this year I tried to update afni and ever since then  
I haven't been able to get any version to install successfully with  
macports.  I'm getting errors on port install afni, afni-latest, or  
afni-devel.  I have Xcode 3.0, OS X 10.5.4 with all updates.  I've  
done port clean --all and port uninstall and port selfupdate and and everything I can think of, but I get this huge  
mess of errors:

gratitude:~ omgoleus$ sudo nice port clean --all afni-devel
--->  Cleaning afni-devel
gratitude:~ omgoleus$ sudo nice port install afni-devel
--->  Fetching afni-devel
--->  Attempting to fetch afni_src.tgz from
--->  Attempting to fetch afni.1 from
--->  Attempting to fetch 3dClustBust.c from
--->  Attempting to fetch TTatlas+tlrc.BRIK.gz from
--->  Attempting to fetch TTatlas+tlrc.HEAD from
--->  Attempting to fetch CA_EZ_v1.5-July3107.tgz from
--->  Attempting to fetch libGLw.a.tiger from
--->  Verifying checksum(s) for afni-devel
--->  Extracting afni-devel
--->  Applying patches to afni-devel
--->  Configuring afni-devel
--->  Building afni-devel with target vastness
Error: Target returned: shell command " cd "/opt/ 
work/afni_src" && make vastness " returned error 2
Command output: cc -march=pentium-m -mtune=prescott -DDARWIN  - 
Wcomment -Wformat -DUSE_TRACING -DHAVE_XDBE -no-cpp-precomp - 
DDONT_USE_MCW_MALLOC -O -I.. -O -I/usr/X11R6/include -I./ -I../ -Igts/ 
src -I/opt/local/include -I../nifti/niftilib -I../nifti/nifticdf -I../ 
nifti/znzlib -I../3DEdge/src   -c -o glut_menu.o glut_menu.c

... [a hundred or so similar lines deleted]

cc -march=pentium-m -mtune=prescott -DDARWIN  -Wcomment -Wformat - 
DSUMA_COMPILED   -I/usr/X11R6/include -I./ -I../ -Igts/src -I/opt/ 
local/include -I../nifti/niftilib -I../nifti/nifticdf -I../nifti/ 
znzlib -I../3DEdge/src -c SUMA_trackball.c
In file included from SUMA_trackball.c:1:
SUMA_suma.h:100:60: error: GL/GLwDrawA.h: No such file or directory
make[1]: *** [SUMA_trackball.o] Error 1
cp: SUMA/libSUMA.a: No such file or directory
cp: SUMA/libSUMA.a: No such file or directory
make: *** [libSUMA.a] Error 1

Error: Status 1 encountered during processing.
gratitude:~ omgoleus$


The errors are slightly different depending on whether I try afni,  
afni-latest, or afni-devel.  Google search found a message from  
someone a couple months ago on this list, but I didn't see any replies  
at all.  I just subscribed here in hopes that there will be some  
answer now!

Thanks in advance for any help you can offer.

Where does the deep and philosophical begin, and where does the
loony and preposterous end?    -Salvador Dalí

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