Gnudatalanguage failed to update w Macports 1.9.0

David Nicholls david at
Thu Jun 10 07:12:27 PDT 2010

Ryan Schmidt wrote:
> On Jun 10, 2010, at 07:38, David Nicholls wrote:
>> Computing dependencies for gnudatalanguage
>> --->  Fetching gnudatalanguage
>> --->  Verifying checksum(s) for gnudatalanguage
>> --->  Extracting gnudatalanguage
>> --->  Configuring gnudatalanguage
>> --->  Building gnudatalanguage
>> Error: Target returned: shell command failed
>> Log for gnudatalanguage is at: /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_ports_math_gnudatalanguage/main.log
>> Error: Unable to upgrade port: 1
>> At the end of that log, at the point where it first mentions an error, it says:
>> :info:build libtool: Version mismatch error.  This is libtool 2.2.6b, but the
>> :info:build libtool: definition of this LT_INIT comes from libtool 2.2.10.
>> :info:build libtool: You should recreate aclocal.m4 with macros from libtool 2.2.6b
>> :info:build libtool: and run autoconf again.
> Can you show us more lines above this error? The libtool port was just updated to 2.2.8 and then quickly to 2.2.10. I suspect some other port you have on your system, which was built when libtool 2.2.6b was current, needs to be rebuilt for 2.2.10, and thus needs a version bump. Hopefully the lines above this message will help us figure out what that port is.

Here's the rest, above the previous (sorry it's a bit long):

:msg:main --->  Computing dependencies for gnudatalanguage:info:main 
.:debug:main Searching for dependency: autoconf
:debug:main Found Dependency: receipt exists for autoconf
:debug:main Searching for dependency: automake
:debug:main Found Dependency: receipt exists for automake
:debug:main Searching for dependency: libtool
:debug:main Found Dependency: receipt exists for libtool
:debug:main Searching for dependency: zlib
:debug:main Found Dependency: receipt exists for zlib
:debug:main Searching for dependency: gsl
:debug:main Found Dependency: receipt exists for gsl
:debug:main Searching for dependency: ncurses
:debug:main Found Dependency: receipt exists for ncurses
:debug:main Searching for dependency: readline
:debug:main Found Dependency: receipt exists for readline
:debug:main Searching for dependency: plplot
:debug:main Found Dependency: receipt exists for plplot
:debug:main Searching for dependency: netcdf
:debug:main Found Dependency: receipt exists for netcdf
:debug:main Searching for dependency: hdf4
:debug:main Found Dependency: receipt exists for hdf4
:debug:main Searching for dependency: hdf5-18
:debug:main Found Dependency: receipt exists for hdf5-18
:debug:main Searching for dependency: grib_api
:debug:main Found Dependency: receipt exists for grib_api
:debug:main Searching for dependency: libproj4
:debug:main Found Dependency: receipt exists for libproj4
:debug:main Searching for dependency: ImageMagick
:debug:main Found Dependency: receipt exists for ImageMagick
:debug:main Searching for dependency: xorg-libX11
:debug:main Found Dependency: receipt exists for xorg-libX11
:debug:main Searching for dependency: udunits2
:debug:main Found Dependency: receipt exists for udunits2
:debug:main Searching for dependency: fftw-3
:debug:main Found Dependency: receipt exists for fftw-3
:debug:main Searching for dependency: fftw-3-single
:debug:main Found Dependency: receipt exists for fftw-3-single
:debug:main Executing org.macports.main (gnudatalanguage)
:debug:main Skipping completed org.macports.fetch (gnudatalanguage)
:debug:main Skipping completed org.macports.checksum (gnudatalanguage)
:debug:main Skipping completed org.macports.extract (gnudatalanguage)
:debug:main Skipping completed org.macports.patch (gnudatalanguage)
:debug:main Skipping completed org.macports.configure (gnudatalanguage)
:msg:main --->  Building gnudatalanguage
:debug:build build phase started at Thu Jun 10 22:33:13 EST 2010
:debug:build Executing (gnudatalanguage)
:debug:build Environment: CPATH='/opt/local/include' 
:debug:build Assembled command: 'cd 
&& /usr/bin/make all'
:info:build /usr/bin/make  all-recursive
:info:build Making all in src
:info:build Making all in antlr
:info:build make[3]: Nothing to be done for `all'.
:info:build Making all in pro
:info:build Making all in dicom
:info:build make[4]: Nothing to be done for `all'.
:info:build make[4]: Nothing to be done for `all-am'.
:info:build /bin/sh ../libtool --tag=CXX   --mode=link /usr/bin/g++-4.0 
  -O2 -arch i386  -L/opt/local/lib -arch i386 -L/opt/local/lib 
-L/opt/local/lib  -L/opt/local/lib -L/opt/local/lib -o gdl 
gdl-assocdata.o gdl-basic_fun_cl.o gdl-basic_fun.o gdl-basic_fun_jmg.o 
gdl-basic_op.o gdl-basic_pro.o gdl-basic_pro_jmg.o gdl-CFMTLexer.o 
gdl-color.o gdl-convert2.o gdl-datatypes.o gdl-dcommon.o gdl-dcompiler.o 
gdl-default_io.o gdl-dinterpreter.o gdl-dnode.o gdl-dpro.o 
gdl-dstructdesc.o gdl-dstructgdl.o gdl-dvar.o gdl-envt.o gdl-extrat.o 
gdl-FMTIn.o gdl-FMTLexer.o gdl-fmtnode.o gdl-FMTOut.o gdl-FMTParser.o 
gdl-gdleventhandler.o gdl-gdlexception.o gdl-gdlgstream.o 
gdl-GDLInterpreter.o gdl-GDLLexer.o gdl-GDLParser.o gdl-gdlpsstream.o 
gdl-gdlsvgstream.o gdl-gdlpython.o gdl-GDLTreeParser.o 
gdl-gdlwinstream.o gdl-gdlxstream.o gdl-getfmtast.o gdl-graphics.o 
gdl-gsl_fun.o gdl-ifmt.o gdl-initct.o gdl-initsysvar.o gdl-io.o 
gdl-libinit_cl.o gdl-libinit.o gdl-libinit_jmg.o gdl-math_fun.o 
gdl-math_fun_jmg.o gdl-math_utl.o gdl-ncdf_att_cl.o gdl-ncdf_cl.o 
gdl-ncdf_dim_cl.o gdl-ncdf_var_cl.o gdl-new.o gdl-objects.o gdl-ofmt.o 
gdl-math_fun_ac.o gdl-libinit_ac.o gdl-math_fun_gm.o gdl-libinit_gm.o 
gdl-math_fun_ng.o gdl-libinit_ng.o gdl-plotting.o gdl-print.o 
gdl-print_tree.o gdl-read.o gdl-str.o gdl-terminfo.o gdl-topython.o 
gdl-typetraits.o gdl-hdf_fun.o gdl-hdf_pro.o gdl-magick_cl.o 
gdl-gdlwidget.o gdl-widget.o gdl-basegdl.o gdl-hdf5_fun.o 
gdl-libinit_mes.o gdl-file.o gdl-image.o gdl-gdljournal.o gdl-convol.o 
gdl-convol_inc0.o gdl-convol_inc1.o gdl-convol_inc2.o 
gdl-sigfpehandler.o gdl-gdlzstream.o gdl-arrayindex.o gdl-fftw.o 
gdl-mpi.o gdl-plot3d_nr.o gdl-grib.o gdl-prognode.o gdl-prognodeexpr.o 
gdl-gdl.o ../src/antlr/libantlr.a -L/usr/X11R6/lib64 -L/usr/X11R6/lib 
-lX11 -lmfhdf -lgslcblas -lgsl -L/opt/local/lib -L/opt/local -lncurses 
-lpng -lopenjpeg -L/opt/local/lib -lreadline -lz -L/opt/local/lib -lgsl 
-lgslcblas -L/opt/local/lib -lplplotd -lplplotcxxd -L/opt/local/lib 
-lMagick++ -lMagickWand -lMagickCore -llcms -ltiff -lfreetype -ljpeg 
-lfftw3 -L/opt/local/lib -lfontconfig -lexpat -lfreetype -lz -liconv 
-lXext -lSM -lICE -lX11 -lXt -lbz2 -lz -lm -lpthread -lltdl 
-L/opt/local/lib -lnetcdf -L/opt/local/lib -L/opt/local/lib/hdf -lmfhdf 
-ldf -ljpeg -lz -lsz -L/opt/local/lib -L/opt/local/lib/hdf 
-L/opt/local/lib/hdf5 -lhdf5 -L/opt/local/lib -lfftw3 -L/opt/local/lib 
-lfftw3f -L/opt/local/lib -lproj4 -L/opt/local/lib -ludunits2 
-L/opt/local/lib -lgrib_api -ljasper

>> And if I want to update other ports in the meantime, how do I stop upgrade from failing on GDL?
> You may not want to attempt to do so; those other port updates may require the gnudatalanguage update.

OK, I'll wait.


ANU RSAA Mt Stromlo

More information about the macports-users mailing list